jaccard_groups_2068

jaccard_groups_2068

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Entry name: jaccard_groups_2068
Common denominator: Jaccard index of protein domains
Number of operons: 6
Average COG: 0.07 +- 0.07

Common protein domains
Domain ID	Domain name	Times found
TIGR02712	urea carboxylase	6/6
PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	6/6
PF02785	Biotin carboxylase C-terminal domain	6/6
PF02682	Carboxyltransferase domain, subdomain C and D	6/6
PF02626	Carboxyltransferase domain, subdomain A and B	6/6
PF01425	Amidase	6/6
PF00364	Biotin-requiring enzyme	6/6
PF00289	Biotin carboxylase, N-terminal domain	6/6
TIGR03424	urea carboxylase-associated protein 1	5/6
PF09347	Domain of unknown function (DUF1989)	5/6
TIGR03425	urea carboxylase-associated protein 2	4/6
PF00440	Bacterial regulatory proteins, tetR family	4/6
TIGR02713	allophanate hydrolase	3/6
TIGR01930	acetyl-CoA C-acyltransferase	3/6
TIGR01509	HAD hydrolase, family IA, variant 3	3/6
PF13520	Amino acid permease	3/6
PF13419	Haloacid dehalogenase-like hydrolase	3/6
PF02803	Thiolase, C-terminal domain	3/6
PF00108	Thiolase, N-terminal domain	3/6

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_695682	98.80851063829788	20	None found	0.08 +- 0.07	True	18 PF00108 PF00289 PF00364 PF00440 PF01425 PF02626 PF02682 PF02785 PF02786 PF02803 PF09347 PF13419 PF13520 TIGR01509 TIGR01930 TIGR02712 TIGR03424 TIGR03425	0
Streptomyces_RBGC_386057	9.828571428571427	15	None found	0.20 +- 0.01	True	12 PF00289 PF00364 PF01425 PF02626 PF02682 PF02785 PF02786 PF09347 TIGR02712 TIGR02713 TIGR03424 TIGR03425	0
Streptomyces_RBGC_610551	442.28571428571433	20	None found	0.02 +- 0.00	True	18 PF00108 PF00289 PF00364 PF00440 PF01425 PF02626 PF02682 PF02785 PF02786 PF02803 PF09347 PF13419 PF13520 TIGR01509 TIGR01930 TIGR02712 TIGR03424 TIGR03425	0
Streptomyces_RBGC_389879	208.0	20	None found	0.04 +- 0.01	True	18 PF00108 PF00289 PF00364 PF00440 PF01425 PF02626 PF02682 PF02785 PF02786 PF02803 PF09347 PF13419 PF13520 TIGR01509 TIGR01930 TIGR02712 TIGR03424 TIGR03425	0
Streptomyces_RBGC_581528	91.0	17	None found	0.08 +- 0.09	True	14 PF00289 PF00364 PF00392 PF00440 PF01425 PF02626 PF02682 PF02785 PF02786 PF02909 PF06736 PF07729 TIGR02712 TIGR02713	0
Streptomyces_RBGC_237603	13.344827586206897	14	None found	0.15 +- 0.02	True	11 PF00289 PF00364 PF01425 PF02626 PF02682 PF02785 PF02786 PF09347 TIGR02712 TIGR02713 TIGR03424	0