jaccard_groups_3204

jaccard_groups_3204

Entry name: jaccard_groups_3204
Common denominator: Jaccard index of protein domains
Number of operons: 3
Average COG: 0.17 +- 0.35

Common protein domains
Domain ID	Domain name	Times found
TIGR02868	thiol reductant ABC exporter, CydC subunit	3/3
TIGR02857	thiol reductant ABC exporter, CydD subunit	3/3
TIGR02138	phosphate ABC transporter, permease protein PstC	3/3
TIGR00974	phosphate ABC transporter, permease protein PstA	3/3
TIGR00203	cytochrome d ubiquinol oxidase, subunit II	3/3
PF13499	EF-hand domain pair	3/3
PF13185	GAF domain	3/3
PF12849	PBP superfamily domain	3/3
PF09995	Uncharacterized protein conserved in bacteria (DUF2236)	3/3
PF07730	Histidine kinase	3/3
PF04203	Sortase domain	3/3
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	3/3
PF02322	Cytochrome bd terminal oxidase subunit II	3/3
PF01654	Cytochrome bd terminal oxidase subunit I	3/3
PF00672	HAMP domain	3/3
PF00664	ABC transporter transmembrane region	3/3
PF00528	Binding-protein-dependent transport system inner membrane component	3/3
PF00512	His Kinase A (phospho-acceptor) domain	3/3
PF00486	Transcriptional regulatory protein, C terminal	3/3
PF00072	Response regulator receiver domain	3/3
PF00005	ABC transporter	3/3
TIGR00458	aspartate--tRNA(Asn) ligase	2/3
PF07411	Domain of unknown function (DUF1508)	2/3
PF05685	Putative restriction endonuclease	2/3
PF01336	OB-fold nucleic acid binding domain	2/3
PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	2/3
PF00152	tRNA synthetases class II (D, K and N)	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_16193	234.33027522935777	33	None found	0.15 +- 0.33	True	27 PF00005 PF00072 PF00152 PF00486 PF00512 PF00528 PF00664 PF00672 PF01135 PF01336 PF01654 PF02322 PF02518 PF04203 PF05685 PF07411 PF07730 PF09995 PF12849 PF13185 PF13499 TIGR00203 TIGR00458 TIGR00974 TIGR02138 TIGR02857 TIGR02868	0
Streptomyces_RBGC_12443	67.35751295336787	31	None found	0.22 +- 0.39	True	22 PF00005 PF00072 PF00486 PF00512 PF00528 PF00664 PF00672 PF01654 PF02322 PF02518 PF04203 PF07411 PF07730 PF09995 PF12849 PF13185 PF13499 TIGR00203 TIGR00974 TIGR02138 TIGR02857 TIGR02868	0
Streptomyces_RBGC_82998	117.80320366132726	32	None found	0.15 +- 0.33	True	26 PF00005 PF00072 PF00152 PF00486 PF00512 PF00528 PF00664 PF00672 PF01135 PF01336 PF01654 PF02322 PF02518 PF04203 PF05685 PF07730 PF09995 PF12849 PF13185 PF13499 TIGR00203 TIGR00458 TIGR00974 TIGR02138 TIGR02857 TIGR02868	0