precursor_groups_27612

precursor_groups_27612

Back to index

Entry name: precursor_groups_27612
Common denominator: Precursor BLAST
Number of operons: 4
Average COG: 0.06 +- 0.05

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF05426	Alginate lyase	4/4
PF00528	Binding-protein-dependent transport system inner membrane component	4/4
PF00295	Glycosyl hydrolases family 28	4/4
TIGR01409	Tat (twin-arginine translocation) pathway signal sequence	3/4
PF13416	Bacterial extracellular solute-binding protein	3/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_443564	118.1818181818182	17	None found	0.08 +- 0.04	True	5 PF00295 PF00528 PF05426 PF13416 TIGR01409	0
Streptomyces_RBGC_109745	118.1818181818182	17	None found	0.08 +- 0.04	True	5 PF00295 PF00528 PF05426 PF13416 TIGR01409	0
Streptomyces_RBGC_668232	206.4	16	None found	0.05 +- 0.05	True	6 PF00135 PF00295 PF00528 PF01547 PF05345 PF05426	0
Streptomyces_RBGC_30582	257.99999999999994	17	None found	0.04 +- 0.04	True	5 PF00295 PF00528 PF05426 PF13416 TIGR01409	0