precursor_groups_42374

Back to index

Entry name: precursor_groups_42374
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.05 +- 0.07

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02937	RNA polymerase sigma factor, sigma-70 family	2/2
TIGR01510	pantetheine-phosphate adenylyltransferase	2/2
PF13646	HEAT repeats	2/2
PF13411	MerR HTH family regulatory protein	2/2
PF12802	MarR family	2/2
PF07690	Major Facilitator Superfamily	2/2
PF04545	Sigma-70, region 4	2/2
PF04542	Sigma-70 region 2	2/2
PF03176	MMPL family	2/2
PF02310	B12 binding domain	2/2
PF01467	Cytidylyltransferase-like	2/2
PF00857	Isochorismatase family	2/2
PF02607	B12 binding domain	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_18659	297.6923076923077	21	lantipeptide-terpene-nrps (total overlap)	0.03 +- 0.04	True	12 PF00857 PF01467 PF02310 PF03176 PF04542 PF04545 PF07690 PF12802 PF13411 PF13646 TIGR01510 TIGR02937	0
Streptomyces_RBGC_544932	128.21917808219177	20	lantipeptide-terpene-nrps (total overlap)	0.06 +- 0.08	True	13 PF00857 PF01467 PF02310 PF02607 PF03176 PF04542 PF04545 PF07690 PF12802 PF13411 PF13646 TIGR01510 TIGR02937	0