precursor_groups_61521

Back to index

Entry name: precursor_groups_61521
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.15 +- 0.33

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02868	thiol reductant ABC exporter, CydC subunit	2/2
TIGR02857	thiol reductant ABC exporter, CydD subunit	2/2
TIGR02138	phosphate ABC transporter, permease protein PstC	2/2
TIGR00974	phosphate ABC transporter, permease protein PstA	2/2
TIGR00458	aspartate--tRNA(Asn) ligase	2/2
TIGR00203	cytochrome d ubiquinol oxidase, subunit II	2/2
PF13499	EF-hand domain pair	2/2
PF13185	GAF domain	2/2
PF12849	PBP superfamily domain	2/2
PF09995	Uncharacterized protein conserved in bacteria (DUF2236)	2/2
PF07730	Histidine kinase	2/2
PF05685	Putative restriction endonuclease	2/2
PF04203	Sortase domain	2/2
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	2/2
PF02322	Cytochrome bd terminal oxidase subunit II	2/2
PF01654	Cytochrome bd terminal oxidase subunit I	2/2
PF01336	OB-fold nucleic acid binding domain	2/2
PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	2/2
PF00672	HAMP domain	2/2
PF00664	ABC transporter transmembrane region	2/2
PF00528	Binding-protein-dependent transport system inner membrane component	2/2
PF00512	His Kinase A (phospho-acceptor) domain	2/2
PF00486	Transcriptional regulatory protein, C terminal	2/2
PF00152	tRNA synthetases class II (D, K and N)	2/2
PF00072	Response regulator receiver domain	2/2
PF00005	ABC transporter	2/2
PF07411	Domain of unknown function (DUF1508)	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_16193	234.33027522935777	33	None found	0.15 +- 0.33	True	27 PF00005 PF00072 PF00152 PF00486 PF00512 PF00528 PF00664 PF00672 PF01135 PF01336 PF01654 PF02322 PF02518 PF04203 PF05685 PF07411 PF07730 PF09995 PF12849 PF13185 PF13499 TIGR00203 TIGR00458 TIGR00974 TIGR02138 TIGR02857 TIGR02868	0
Streptomyces_RBGC_82998	117.80320366132726	32	None found	0.15 +- 0.33	True	26 PF00005 PF00072 PF00152 PF00486 PF00512 PF00528 PF00664 PF00672 PF01135 PF01336 PF01654 PF02322 PF02518 PF04203 PF05685 PF07730 PF09995 PF12849 PF13185 PF13499 TIGR00203 TIGR00458 TIGR00974 TIGR02138 TIGR02857 TIGR02868	0