precursor_jaccard_groups_628

precursor_jaccard_groups_628

Back to index

Entry name: precursor_jaccard_groups_628
Common denominator: Overlap in jaccard and precursor pairs
Number of operons: 9
Average COG: 0.21 +- 0.33

Common protein domains
Domain ID	Domain name	Times found
TIGR02937	RNA polymerase sigma factor, sigma-70 family	9/9
TIGR00554	pantothenate kinase	9/9
TIGR00271	uncharacterized hydrophobic domain	9/9
PF08281	Sigma-70, region 4	9/9
PF04542	Sigma-70 region 2	9/9
PF04149	Domain of unknown function (DUF397)	9/9
PF04087	Domain of unknown function (DUF389)	9/9
PF00485	Phosphoribulokinase / Uridine kinase family	9/9
PF13560	Helix-turn-helix domain	8/9
PF07228	Stage II sporulation protein E (SpoIIE)	7/9
PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	6/9

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_513109	47.07818930041152	21	None found	0.17 +- 0.31	True	12 PF00485 PF04087 PF04149 PF04542 PF05193 PF07228 PF08281 PF09346 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_39019	21.032608695652172	19	None found	0.24 +- 0.31	True	12 PF00485 PF00583 PF00903 PF04087 PF04149 PF04542 PF07228 PF08281 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_580557	18.16901408450704	20	None found	0.22 +- 0.34	True	12 PF00485 PF04087 PF04149 PF04542 PF05193 PF07228 PF08281 PF09346 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_201417	19.54887218045113	20	None found	0.20 +- 0.33	True	12 PF00485 PF04087 PF04149 PF04542 PF05193 PF07228 PF08281 PF09346 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_556655	15.082872928176794	17	None found	0.20 +- 0.34	True	10 PF00485 PF00903 PF04087 PF04149 PF04542 PF08281 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_398383	21.186131386861312	19	None found	0.24 +- 0.33	True	12 PF00485 PF00583 PF00903 PF04087 PF04149 PF04542 PF07228 PF08281 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_594386	21.032608695652172	19	None found	0.24 +- 0.31	True	12 PF00485 PF00583 PF00903 PF04087 PF04149 PF04542 PF07228 PF08281 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_249775	15.166666666666666	17	None found	0.20 +- 0.34	True	10 PF00485 PF00903 PF04087 PF04149 PF04542 PF08281 PF13560 TIGR00271 TIGR00554 TIGR02937	0
Streptomyces_RBGC_445190	24.046242774566476	18	None found	0.17 +- 0.32	True	10 PF00485 PF00903 PF04087 PF04149 PF04542 PF07228 PF08281 TIGR00271 TIGR00554 TIGR02937	0