GCF_001270495.1

RiPP BGCs Streptomyces viridochromogenes

Entry name: Streptomyces viridochromogenes
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.04 +- 0.06

Common protein domains
Domain ID	Domain name	Times found
TIGR03425	urea carboxylase-associated protein 2	1/2
TIGR03424	urea carboxylase-associated protein 1	1/2
TIGR02712	urea carboxylase	1/2
TIGR01930	acetyl-CoA C-acyltransferase	1/2
TIGR01509	HAD hydrolase, family IA, variant 3	1/2
PF18603	L-amino acid ligase C-terminal domain 2	1/2
PF18130	ATP-grasp N-terminal domain	1/2
PF13535	ATP-grasp domain	1/2
PF13520	Amino acid permease	1/2
PF13419	Haloacid dehalogenase-like hydrolase	1/2
PF13394	4Fe-4S single cluster domain	1/2
PF09347	Domain of unknown function (DUF1989)	1/2
PF07690	Major Facilitator Superfamily	1/2
PF06508	Queuosine biosynthesis protein QueC	1/2
PF06368	Methylaspartate mutase E chain (MutE)	1/2
PF02803	Thiolase, C-terminal domain	1/2
PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	1/2
PF02785	Biotin carboxylase C-terminal domain	1/2
PF02682	Carboxyltransferase domain, subdomain C and D	1/2
PF02626	Carboxyltransferase domain, subdomain A and B	1/2
PF02310	B12 binding domain	1/2
PF01425	Amidase	1/2
PF01242	6-pyruvoyl tetrahydropterin synthase	1/2
PF01227	GTP cyclohydrolase I	1/2
PF00668	Condensation domain	1/2
PF00501	AMP-binding enzyme	1/2
PF00487	Fatty acid desaturase	1/2
PF00440	Bacterial regulatory proteins, tetR family	1/2
PF00364	Biotin-requiring enzyme	1/2
PF00289	Biotin carboxylase, N-terminal domain	1/2
PF00108	Thiolase, N-terminal domain	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_695682	98.80851063829788	20	None found	0.08 +- 0.07	True	18 PF00108 PF00289 PF00364 PF00440 PF01425 PF02626 PF02682 PF02785 PF02786 PF02803 PF09347 PF13419 PF13520 TIGR01509 TIGR01930 TIGR02712 TIGR03424 TIGR03425	0
Streptomyces_RBGC_691822	903.0	18	nucleoside-nrps (total overlap)	0.01 +- 0.00	True	13 PF00487 PF00501 PF00668 PF01227 PF01242 PF02310 PF06368 PF06508 PF07690 PF13394 PF13535 PF18130 PF18603	0