GCF_003994375.1

RiPP BGCs Streptomyces lydicus

Entry name: Streptomyces lydicus
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.06 +- 0.08

Common protein domains
Domain ID	Domain name	Times found
PF07690	Major Facilitator Superfamily	2/2
TIGR03975	ribosomal peptide maturation radical SAM protein 1	1/2
TIGR02937	RNA polymerase sigma factor, sigma-70 family	1/2
PF13581	Histidine kinase-like ATPase domain	1/2
PF10025	Uncharacterized conserved protein (DUF2267)	1/2
PF08281	Sigma-70, region 4	1/2
PF07681	DoxX	1/2
PF04542	Sigma-70 region 2	1/2
PF04055	Radical SAM superfamily	1/2
PF02515	CoA-transferase family III	1/2
PF02310	B12 binding domain	1/2
PF01546	Peptidase family M20/M25/M40	1/2
PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	1/2
PF00378	Enoyl-CoA hydratase/isomerase	1/2
PF00355	Rieske [2Fe-2S] domain	1/2
PF00326	Prolyl oligopeptidase family	1/2
PF00067	Cytochrome P450	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_8734	116.63013698630138	22	bacteriocin (partial overlap)	0.05 +- 0.06	True	11 PF00067 PF00326 PF00355 PF02310 PF04055 PF04542 PF07690 PF08281 PF10025 TIGR02937 TIGR03975	1
Streptomyces_RBGC_218072	93.81818181818181	19	None found	0.06 +- 0.10	True	7 PF00378 PF00903 PF01546 PF02515 PF07681 PF07690 PF13581	0