precursor_groups_2388

precursor_groups_2388

Entry name: precursor_groups_2388
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.07 +- 0.19

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02937	RNA polymerase sigma factor, sigma-70 family	3/3
TIGR01525	heavy metal translocating P-type ATPase	3/3
TIGR00802	transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family	3/3
PF14237	GYF domain 2	3/3
PF13421	SPFH domain-Band 7 family	3/3
PF08281	Sigma-70, region 4	3/3
PF07690	Major Facilitator Superfamily	3/3
PF05118	Aspartyl/Asparaginyl beta-hydroxylase	3/3
PF04542	Sigma-70 region 2	3/3
PF04314	Copper chaperone PCu(A)C	3/3
PF03824	High-affinity nickel-transport protein	3/3
PF00702	haloacid dehalogenase-like hydrolase	3/3
PF00403	Heavy-metal-associated domain	3/3
PF00122	E1-E2 ATPase	3/3
TIGR01733	amino acid adenylation domain	2/3
PF13738	Pyridine nucleotide-disulphide oxidoreductase	2/3
PF13193	AMP-binding enzyme C-terminal domain	2/3
PF10862	FcoT-like thioesterase domain	2/3
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	2/3
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	2/3
PF07993	Male sterility protein	2/3
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	2/3
PF01070	FMN-dependent dehydrogenase	2/3
PF00668	Condensation domain	2/3
PF00550	Phosphopantetheine attachment site	2/3
PF00501	AMP-binding enzyme	2/3
PF00067	Cytochrome P450	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_534428	321.2355212355213	31	t1pks-nrps (total overlap)	0.10 +- 0.22	True	26 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF08541 PF08545 PF10862 PF13193 PF13421 PF14237 TIGR00747 TIGR00802 TIGR01525 TIGR01733 TIGR01746 TIGR02937	0
Streptomyces_RBGC_408458	844.3636363636361	26	nrps (partial overlap)	0.04 +- 0.08	True	17 PF00067 PF00122 PF00403 PF00702 PF01070 PF03824 PF04314 PF04542 PF05118 PF07690 PF08281 PF13421 PF13738 PF14237 TIGR00802 TIGR01525 TIGR02937	0
Streptomyces_RBGC_22994	934.3750000000001	35	nrps (partial overlap)	0.06 +- 0.21	True	27 PF00067 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF01070 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF08541 PF08545 PF10862 PF13193 PF13421 PF13738 PF14237 TIGR00802 TIGR01525 TIGR01733 TIGR02937	0