precursor_groups_4

precursor_groups_4

Back to index

Entry name: precursor_groups_4
Common denominator: Precursor BLAST
Number of operons: 4
Average COG: 0.05 +- 0.09

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01509	HAD hydrolase, family IA, variant 3	3/4
PF13419	Haloacid dehalogenase-like hydrolase	3/4
PF08386	TAP-like protein	3/4
PF04149	Domain of unknown function (DUF397)	3/4
PF02388	FemAB family	3/4
PF00561	alpha/beta hydrolase fold	3/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_204818	390.0	14	None found	0.02 +- 0.02	True	5 PF00069 PF03734 PF04542 PF08281 TIGR02937	0
Streptomyces_RBGC_647781	40.3125	15	None found	0.05 +- 0.08	True	6 PF00561 PF02388 PF04149 PF08386 PF13419 TIGR01509	0
Streptomyces_RBGC_218758	28.043478260869566	15	None found	0.07 +- 0.12	True	6 PF00561 PF02388 PF04149 PF08386 PF13419 TIGR01509	0
Streptomyces_RBGC_613827	28.043478260869566	15	None found	0.07 +- 0.12	True	6 PF00561 PF02388 PF04149 PF08386 PF13419 TIGR01509	0