jaccard_groups_2010

jaccard_groups_2010

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Entry name: jaccard_groups_2010
Common denominator: Jaccard index of protein domains
Number of operons: 15
Average COG: 0.04 +- 0.05

Common protein domains
Domain ID	Domain name	Times found
PF17042	Nucleotide-binding C-terminal domain	15/15
PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	15/15
PF07005	Sugar-binding N-terminal domain	15/15
PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase	15/15
PF07729	FCD domain	14/15
PF00392	Bacterial regulatory proteins, gntR family	14/15
TIGR00167	ketose-bisphosphate aldolase	9/15
PF02447	GntP family permease	9/15
PF01116	Fructose-bisphosphate aldolase class-II	9/15

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_572444	323.6315789473683	24	None found	0.03 +- 0.03	True	17 PF00121 PF00392 PF00596 PF01261 PF01370 PF02502 PF02733 PF02734 PF03446 PF03447 PF03600 PF07005 PF07690 PF07729 PF14833 PF17042 TIGR02133	0
Streptomyces_RBGC_50218	276.42857142857144	17	None found	0.02 +- 0.01	True	9 PF00392 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167	0
Streptomyces_RBGC_610676	90.0	17	None found	0.06 +- 0.03	True	11 PF00392 PF00775 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167 TIGR00791	0
Streptomyces_RBGC_409081	260.0	17	None found	0.02 +- 0.01	True	9 PF00392 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167	0
Streptomyces_RBGC_502742	181.99999999999997	18	None found	0.03 +- 0.02	True	12 PF00392 PF00775 PF01116 PF02447 PF03446 PF07005 PF07729 PF14016 PF14833 PF17042 TIGR00167 TIGR00791	0
Streptomyces_RBGC_425932	133.8235294117647	18	None found	0.04 +- 0.03	True	12 PF00392 PF00775 PF01116 PF02447 PF03446 PF07005 PF07729 PF14016 PF14833 PF17042 TIGR00167 TIGR00791	0
Streptomyces_RBGC_69280	96.74999999999999	19	None found	0.07 +- 0.10	True	11 PF00171 PF00392 PF00596 PF01261 PF01370 PF03446 PF07005 PF07690 PF07729 PF14833 PF17042	0
Streptomyces_RBGC_79811	195.0	21	None found	0.05 +- 0.09	True	16 PF00392 PF01116 PF01614 PF02447 PF03446 PF07005 PF07228 PF07729 PF08447 PF09339 PF13185 PF13407 PF13581 PF14833 PF17042 TIGR00167	0
Streptomyces_RBGC_631787	201.29032258064515	19	t3pks (total overlap)	0.03 +- 0.02	True	10 PF00392 PF00596 PF01261 PF01370 PF03446 PF07005 PF07690 PF07729 PF14833 PF17042	0
Streptomyces_RBGC_394123	133.44827586206895	17	None found	0.04 +- 0.02	True	9 PF00392 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167	0
Streptomyces_RBGC_420020	71.66666666666667	11	None found	0.04 +- 0.01	True	7 PF00596 PF03446 PF07005 PF07690 PF13377 PF14833 PF17042	0
Streptomyces_RBGC_403783	216.66666666666666	17	None found	0.02 +- 0.02	True	11 PF00392 PF00775 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167 TIGR00791	0
Streptomyces_RBGC_62940	216.66666666666666	21	None found	0.03 +- 0.04	True	11 PF00392 PF00596 PF01261 PF01370 PF03372 PF03446 PF07005 PF07690 PF07729 PF14833 PF17042	0
Streptomyces_RBGC_82543	645.0	17	None found	0.01 +- 0.00	True	9 PF00392 PF01116 PF02447 PF03446 PF07005 PF07729 PF14833 PF17042 TIGR00167	0
Streptomyces_RBGC_294335	146.43243243243242	18	None found	0.04 +- 0.02	True	10 PF00392 PF00596 PF01261 PF01370 PF03446 PF07005 PF07690 PF07729 PF14833 PF17042	0