jaccard_groups_2424

jaccard_groups_2424

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Entry name: jaccard_groups_2424
Common denominator: Jaccard index of protein domains
Number of operons: 9
Average COG: 0.02 +- 0.03

Common protein domains
Domain ID	Domain name	Times found
TIGR01835	hydroxymethylglutaryl-CoA synthase	9/9
TIGR01240	diphosphomevalonate decarboxylase	9/9
TIGR01220	phosphomevalonate kinase	9/9
TIGR00549	mevalonate kinase	9/9
PF18376	Mevalonate 5-diphosphate decarboxylase C-terminal domain	9/9
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	9/9
PF08544	GHMP kinases C terminal	9/9
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	9/9
PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal	9/9
PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal	9/9
PF00368	Hydroxymethylglutaryl-coenzyme A reductase	9/9
PF00288	GHMP kinases N terminal domain	9/9
TIGR02151	isopentenyl-diphosphate delta-isomerase, type 2	8/9
PF01070	FMN-dependent dehydrogenase	8/9
PF00348	Polyprenyl synthetase	7/9
PF01593	Flavin containing amine oxidoreductase	5/9

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_115490	390.0000000000001	23	terpene (partial overlap)	0.03 +- 0.03	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_83660	499.53191489361706	25	thiopeptide-terpene (partial overlap)	0.03 +- 0.06	True	20 PF00288 PF00348 PF00368 PF00550 PF01070 PF01154 PF01494 PF02607 PF08540 PF08541 PF08544 PF08545 PF09995 PF13411 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_25238	540.5714285714286	21	terpene-t1pks (total overlap)	0.01 +- 0.02	True	24 PF00107 PF00109 PF00288 PF00368 PF00550 PF00698 PF01070 PF01154 PF02801 PF08240 PF08242 PF08540 PF08541 PF08544 PF08545 PF08659 PF14765 PF16197 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_407555	532.125	23	terpene (partial overlap)	0.02 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_408704	323.77358490566036	23	terpene (partial overlap)	0.03 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_514910	817.1428571428571	23	terpene (partial overlap)	0.01 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_335219	532.125	23	terpene (partial overlap)	0.02 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0
Streptomyces_RBGC_150526	1032.0	20	None found	0.01 +- 0.02	True	13 PF00288 PF00368 PF00550 PF01154 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835	0
Streptomyces_RBGC_453654	642.3529411764707	32	nrps (partial overlap)	0.02 +- 0.02	True	25 PF00067 PF00288 PF00348 PF00368 PF00432 PF00550 PF00561 PF01070 PF01154 PF01648 PF02401 PF03060 PF08540 PF08541 PF08544 PF08545 PF11583 PF13243 PF17837 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151	0