jaccard_groups_2738

jaccard_groups_2738

Back to index

Entry name: jaccard_groups_2738
Common denominator: Jaccard index of protein domains
Number of operons: 11
Average COG: 0.03 +- 0.03

Common protein domains
Domain ID	Domain name	Times found
PF12833	Helix-turn-helix domain	11/11
PF12625	Arabinose-binding domain of AraC transcription regulator, N-term	11/11
PF08240	Alcohol dehydrogenase GroES-like domain	11/11
PF07690	Major Facilitator Superfamily	11/11
PF06821	Serine hydrolase	11/11
PF05853	beta-keto acid cleavage enzyme	11/11
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	11/11
PF00107	Zinc-binding dehydrogenase	11/11
TIGR01217	acetoacetate-CoA ligase	7/11
PF16177	Acetyl-coenzyme A synthetase N-terminus	7/11
PF13193	AMP-binding enzyme C-terminal domain	7/11
PF00501	AMP-binding enzyme	7/11

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_432115	702.3333333333334	19	None found	0.02 +- 0.01	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_354121	665.3684210526313	19	None found	0.02 +- 0.02	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_116484	294.0	19	None found	0.05 +- 0.02	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_400153	243.4042553191489	21	nrps (total overlap)	0.03 +- 0.04	True	14 PF00107 PF01546 PF02668 PF02746 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13378 PF13556 PF17853 TIGR01928	0
Streptomyces_RBGC_175331	132.6857142857143	17	None found	0.05 +- 0.02	True	8 PF00107 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833	0
Streptomyces_RBGC_605563	195.0	18	terpene-otherks-t1pks-nrps (partial overlap)	0.03 +- 0.02	True	8 PF00107 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833	0
Streptomyces_RBGC_169185	351.16666666666663	18	None found	0.02 +- 0.01	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_262295	393.51351351351354	20	None found	0.04 +- 0.01	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_97436	130.0	18	None found	0.05 +- 0.02	True	12 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF16177 TIGR01217	0
Streptomyces_RBGC_129368	312.0	17	None found	0.02 +- 0.01	True	8 PF00107 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833	0
Streptomyces_RBGC_694204	459.6428571428571	20	None found	0.02 +- 0.02	True	14 PF00072 PF00107 PF00501 PF02668 PF05853 PF06821 PF07690 PF08240 PF12625 PF12833 PF13193 PF14016 PF16177 TIGR01217	0