jaccard_groups_2838

jaccard_groups_2838

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Entry name: jaccard_groups_2838
Common denominator: Jaccard index of protein domains
Number of operons: 9
Average COG: 0.11 +- 0.23

Common protein domains
Domain ID	Domain name	Times found
TIGR02980	RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	9/9
TIGR01733	amino acid adenylation domain	9/9
TIGR01720	non-ribosomal peptide synthase domain TIGR01720	9/9
PF13193	AMP-binding enzyme C-terminal domain	9/9
PF12401	Protein of unknown function (DUF2662)	9/9
PF04545	Sigma-70, region 4	9/9
PF04542	Sigma-70 region 2	9/9
PF04539	Sigma-70 region 3	9/9
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	9/9
PF01061	ABC-2 type transporter	9/9
PF00672	HAMP domain	9/9
PF00668	Condensation domain	9/9
PF00550	Phosphopantetheine attachment site	9/9
PF00512	His Kinase A (phospho-acceptor) domain	9/9
PF00501	AMP-binding enzyme	9/9
PF00486	Transcriptional regulatory protein, C terminal	9/9
PF00072	Response regulator receiver domain	9/9
PF00005	ABC transporter	9/9
PF17196	Protein of unknown function (DUF5133)	8/9

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_147473	86.98850574712644	22	t1pks-lassopeptide-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_241438	420.44444444444446	22	t1pks-nrps (total overlap)	0.04 +- 0.02	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_533710	86.98850574712644	22	t1pks-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_399142	208.29357798165137	22	thiopeptide-terpene-nrps (total overlap)	0.08 +- 0.13	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_156496	117.0	24	t1pks-nrps (total overlap)	0.15 +- 0.27	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_497808	86.98850574712644	22	t1pks-lassopeptide-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_619722	562.9090909090909	20	t1pks-terpene-nrps (total overlap)	0.03 +- 0.06	True	18 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_448655	158.8888888888889	22	t1pks-nrps (total overlap)	0.10 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_468687	493.5652173913044	22	t1pks-lassopeptide-nrps (total overlap)	0.03 +- 0.03	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0