jaccard_groups_3003

Back to index

Entry name: jaccard_groups_3003
Common denominator: Jaccard index of protein domains
Number of operons: 9
Average COG: 0.02 +- 0.07

Common protein domains
Domain ID	Domain name	Times found
PF13622	Thioesterase-like superfamily	9/9
PF00550	Phosphopantetheine attachment site	9/9
PF00501	AMP-binding enzyme	9/9
PF00487	Fatty acid desaturase	9/9
PF00301	Rubredoxin	9/9
PF00067	Cytochrome P450	9/9
PF07690	Major Facilitator Superfamily	8/9
PF12679	ABC-2 family transporter protein	5/9
PF12146	Serine aminopeptidase, S33	5/9
PF00005	ABC transporter	5/9

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_372474	303.33333333333337	22	t1pks-terpene (total overlap)	0.02 +- 0.01	True	8 PF00067 PF00301 PF00487 PF00501 PF00550 PF07690 PF12697 PF13622
Streptomyces_RBGC_680964	1605.3333333333333	26	terpene-t1pks-nrps (total overlap)	0.01 +- 0.01	True	10 PF00067 PF00301 PF00326 PF00487 PF00501 PF00550 PF07690 PF12697 PF13622 TIGR00711
Streptomyces_RBGC_11036	117.73584905660381	19	None found	0.07 +- 0.12	True	9 PF00067 PF00301 PF00487 PF00501 PF00550 PF00561 PF00872 PF12146 PF13622
Streptomyces_RBGC_137017	1712.9411764705883	26	t1pks-terpene-nrps (total overlap)	0.01 +- 0.01	True	9 PF00067 PF00301 PF00326 PF00487 PF00501 PF00550 PF07690 PF12697 PF13622
Streptomyces_RBGC_343130	1128.75	25	t1pks-nrps (partial overlap)	0.01 +- 0.01	True	11 PF00005 PF00067 PF00301 PF00487 PF00501 PF00550 PF07690 PF12146 PF12679 PF13622 TIGR00711
Streptomyces_RBGC_598292	512.0	27	terpene-nrps (total overlap)	0.06 +- 0.16	True	15 PF00005 PF00067 PF00144 PF00301 PF00392 PF00487 PF00501 PF00550 PF07690 PF08281 PF12146 PF12679 PF13231 PF13622 TIGR00711
Streptomyces_RBGC_208028	932.1290322580643	25	lantipeptide-nrps (total overlap)	0.02 +- 0.02	True	11 PF00005 PF00067 PF00301 PF00392 PF00487 PF00501 PF00550 PF07690 PF12146 PF12679 PF13622
Streptomyces_RBGC_657139	3476.21052631579	28	terpene (partial overlap)	0.01 +- 0.01	True	14 PF00005 PF00067 PF00144 PF00301 PF00392 PF00487 PF00501 PF00550 PF07690 PF08281 PF08386 PF12146 PF12679 PF13622
Streptomyces_RBGC_509382	1935.0	26	nrps (total overlap)	0.01 +- 0.00	True	13 PF00005 PF00067 PF00301 PF00392 PF00487 PF00501 PF00550 PF07690 PF08281 PF12679 PF12697 PF13622 TIGR00711