jaccard_groups_3200

jaccard_groups_3200

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Entry name: jaccard_groups_3200
Common denominator: Jaccard index of protein domains
Number of operons: 5
Average COG: 0.07 +- 0.22

Common protein domains
Domain ID	Domain name	Times found
TIGR02100	glycogen debranching enzyme GlgX	5/5
TIGR01515	1,4-alpha-glucan branching enzyme	5/5
TIGR00377	anti-anti-sigma factor	5/5
PF18085	Maltokinase N-terminal cap domain	5/5
PF17124	ThiJ/PfpI family-like	5/5
PF13614	AAA domain	5/5
PF13581	Histidine kinase-like ATPase domain	5/5
PF13546	DDE superfamily endonuclease	5/5
PF13466	STAS domain	5/5
PF13460	NAD(P)H-binding	5/5
PF13380	CoA binding domain	5/5
PF11896	Domain of unknown function (DUF3416)	5/5
PF07690	Major Facilitator Superfamily	5/5
PF07228	Stage II sporulation protein E (SpoIIE)	5/5
PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	5/5
PF07110	EthD domain	5/5
PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	5/5
PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	5/5
PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	5/5
PF01965	DJ-1/PfpI family	5/5
PF01740	STAS domain	5/5
PF00483	Nucleotidyl transferase	5/5
PF00205	Thiamine pyrophosphate enzyme, central domain	5/5
PF00128	Alpha amylase, catalytic domain	5/5
PF02806	Alpha amylase, C-terminal all-beta domain	4/5
PF00132	Bacterial transferase hexapeptide (six repeats)	4/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_401269	243.75000000000003	31	None found	0.06 +- 0.20	True	26 PF00128 PF00132 PF00205 PF00483 PF01740 PF01965 PF02775 PF02776 PF02806 PF02922 PF07110 PF07221 PF07228 PF07690 PF11896 PF13380 PF13460 PF13466 PF13546 PF13581 PF13614 PF17124 PF18085 TIGR00377 TIGR01515 TIGR02100	0
Streptomyces_RBGC_105367	243.75000000000006	31	bacteriocin (partial overlap)	0.06 +- 0.20	True	27 PF00128 PF00132 PF00205 PF00483 PF01740 PF01965 PF02775 PF02776 PF02806 PF02922 PF07110 PF07221 PF07228 PF07690 PF11896 PF13380 PF13460 PF13466 PF13546 PF13581 PF13614 PF17124 PF18085 TIGR00377 TIGR00711 TIGR01515 TIGR02100	0
Streptomyces_RBGC_557643	138.2142857142857	31	None found	0.11 +- 0.28	True	24 PF00128 PF00205 PF00483 PF01740 PF01965 PF02775 PF02776 PF02922 PF07110 PF07221 PF07228 PF07690 PF11896 PF13380 PF13460 PF13466 PF13546 PF13581 PF13614 PF17124 PF18085 TIGR00377 TIGR01515 TIGR02100	0
Streptomyces_RBGC_687243	143.08098591549296	31	bacteriocin (partial overlap)	0.10 +- 0.28	True	27 PF00128 PF00132 PF00205 PF00483 PF01740 PF01965 PF02775 PF02776 PF02806 PF02922 PF07110 PF07221 PF07228 PF07690 PF11896 PF13380 PF13460 PF13466 PF13546 PF13581 PF13614 PF17124 PF18085 TIGR00377 TIGR00711 TIGR01515 TIGR02100	0
Streptomyces_RBGC_186927	712.8947368421051	31	None found	0.02 +- 0.03	True	26 PF00128 PF00132 PF00205 PF00483 PF01740 PF01965 PF02775 PF02776 PF02806 PF02922 PF07110 PF07221 PF07228 PF07690 PF11896 PF13380 PF13460 PF13466 PF13546 PF13581 PF13614 PF17124 PF18085 TIGR00377 TIGR01515 TIGR02100	0