jaccard_groups_3299

jaccard_groups_3299

Entry name: jaccard_groups_3299
Common denominator: Jaccard index of protein domains
Number of operons: 4
Average COG: 0.18 +- 0.31

Common protein domains
Domain ID	Domain name	Times found
TIGR01181	dTDP-glucose 4,6-dehydratase	4/4
TIGR00747	3-oxoacyl-[acyl-carrier-protein] synthase III	4/4
PF16363	GDP-mannose 4,6 dehydratase	4/4
PF13191	AAA ATPase domain	4/4
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	4/4
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	4/4
PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	4/4
PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	4/4
PF00483	Nucleotidyl transferase	4/4
PF00196	Bacterial regulatory proteins, luxR family	4/4
TIGR01207	glucose-1-phosphate thymidylyltransferase	3/4
PF16197	Ketoacyl-synthetase C-terminal extension	3/4
PF02801	Beta-ketoacyl synthase, C-terminal domain	3/4
PF00109	Beta-ketoacyl synthase, N-terminal domain	3/4
TIGR04516	glycosyltransferase, activator-dependent family	2/4
PF18605	Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain	2/4
PF18369	Polyketide synthase dimerisation element domain	2/4
PF14765	Polyketide synthase dehydratase	2/4
PF08990	Erythronolide synthase docking	2/4
PF08659	KR domain	2/4
PF07730	Histidine kinase	2/4
PF06722	Protein of unknown function (DUF1205)	2/4
PF03559	NDP-hexose 2,3-dehydratase	2/4
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	2/4
PF01370	NAD dependent epimerase/dehydratase family	2/4
PF01061	ABC-2 type transporter	2/4
PF00975	Thioesterase domain	2/4
PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase	2/4
PF00698	Acyl transferase domain	2/4
PF00550	Phosphopantetheine attachment site	2/4
PF00248	Aldo/keto reductase family	2/4
PF00201	UDP-glucoronosyl and UDP-glucosyl transferase	2/4
PF00072	Response regulator receiver domain	2/4
PF00005	ABC transporter	2/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_412146	91.76470588235294	12	None found	0.07 +- 0.10	True	14 PF00109 PF00196 PF00483 PF00725 PF02737 PF02801 PF08541 PF08545 PF13191 PF16197 PF16363 TIGR00747 TIGR01181 TIGR01207	0
Streptomyces_RBGC_347082	135.36322869955157	29	t1pks (total overlap)	0.19 +- 0.33	True	34 PF00005 PF00072 PF00109 PF00196 PF00201 PF00248 PF00483 PF00550 PF00698 PF00725 PF00908 PF00975 PF01061 PF01370 PF02518 PF02737 PF02801 PF03559 PF06722 PF07730 PF08541 PF08545 PF08659 PF08990 PF13191 PF14765 PF16197 PF16363 PF18369 PF18605 TIGR00747 TIGR01181 TIGR01207 TIGR04516	0
Streptomyces_RBGC_624651	130.46594982078855	31	t1pks (total overlap)	0.21 +- 0.32	True	33 PF00005 PF00072 PF00109 PF00196 PF00201 PF00248 PF00483 PF00550 PF00698 PF00725 PF00908 PF00975 PF01061 PF01370 PF02518 PF02737 PF02801 PF03559 PF06722 PF07730 PF08541 PF08545 PF08659 PF08990 PF13191 PF14765 PF16197 PF16363 PF18369 PF18605 TIGR00747 TIGR01181 TIGR04516	0
Streptomyces_RBGC_254836	31.31067961165048	13	t1pks (total overlap)	0.16 +- 0.27	True	11 PF00196 PF00483 PF00725 PF02737 PF08541 PF08545 PF13191 PF16363 TIGR00747 TIGR01181 TIGR01207	0