jaccard_groups_3370

jaccard_groups_3370

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Entry name: jaccard_groups_3370
Common denominator: Jaccard index of protein domains
Number of operons: 7
Average COG: 0.05 +- 0.10

Common protein domains
Domain ID	Domain name	Times found
TIGR01088	3-dehydroquinate dehydratase, type II	7/7
PF18317	Shikimate 5'-dehydrogenase C-terminal domain	7/7
PF09339	IclR helix-turn-helix domain	7/7
PF08501	Shikimate dehydrogenase substrate binding domain	7/7
PF07836	DmpG-like communication domain	7/7
PF07690	Major Facilitator Superfamily	7/7
PF02627	Carboxymuconolactone decarboxylase family	7/7
PF01614	Bacterial transcriptional regulator	7/7
PF01557	Fumarylacetoacetate (FAA) hydrolase family	7/7
PF01261	Xylose isomerase-like TIM barrel	7/7
PF01220	Dehydroquinase class II	7/7
PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	7/7
PF00682	HMGL-like	7/7
PF00083	Sugar (and other) transporter	7/7
TIGR03217	4-hydroxy-2-oxovalerate aldolase	6/7
TIGR03215	acetaldehyde dehydrogenase (acetylating)	6/7
PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation	6/7
PF01118	Semialdehyde dehydrogenase, NAD binding domain	6/7

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_44562	113.64238410596028	22	None found	0.10 +- 0.14	True	18 PF00083 PF00682 PF00903 PF01118 PF01220 PF01261 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF18317 TIGR01088 TIGR03215 TIGR03217	0
Streptomyces_RBGC_607899	247.67999999999995	21	None found	0.05 +- 0.09	True	20 PF00083 PF00682 PF00903 PF01118 PF01220 PF01261 PF01408 PF01488 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF18317 TIGR01088 TIGR03215 TIGR03217	0
Streptomyces_RBGC_611785	175.37735849056605	23	None found	0.06 +- 0.13	True	18 PF00083 PF00682 PF00903 PF01118 PF01220 PF01261 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF18317 TIGR01088 TIGR03215 TIGR03217	0
Streptomyces_RBGC_325786	210.22222222222217	22	None found	0.05 +- 0.10	True	18 PF00083 PF00682 PF00903 PF01118 PF01220 PF01261 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF18317 TIGR01088 TIGR03215 TIGR03217	0
Streptomyces_RBGC_402479	709.5	21	None found	0.01 +- 0.00	True	14 PF00083 PF00682 PF00903 PF01220 PF01261 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09339 PF18317 TIGR01088	0
Streptomyces_RBGC_5972	1085.1176470588234	24	None found	0.01 +- 0.01	True	19 PF00083 PF00665 PF00682 PF00903 PF01118 PF01220 PF01261 PF01557 PF01614 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF18317 TIGR01088 TIGR03215 TIGR03217	0
Streptomyces_RBGC_271343	696.289156626506	28	None found	0.04 +- 0.08	True	23 PF00083 PF00135 PF00682 PF00903 PF00933 PF01118 PF01220 PF01261 PF01408 PF01557 PF01614 PF01915 PF02627 PF07690 PF07836 PF08501 PF09290 PF09339 PF14310 PF18317 TIGR01088 TIGR03215 TIGR03217	0