jaccard_groups_3403

jaccard_groups_3403

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Entry name: jaccard_groups_3403
Common denominator: Jaccard index of protein domains
Number of operons: 6
Average COG: 0.05 +- 0.14

Common protein domains
Domain ID	Domain name	Times found
TIGR03860	FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	6/6
TIGR01733	amino acid adenylation domain	6/6
TIGR01341	aconitate hydratase 1	6/6
PF18603	L-amino acid ligase C-terminal domain 2	6/6
PF13535	ATP-grasp domain	6/6
PF13378	Enolase C-terminal domain-like	6/6
PF13193	AMP-binding enzyme C-terminal domain	6/6
PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	6/6
PF01613	Flavin reductase like domain	6/6
PF00694	Aconitase C-terminal domain	6/6
PF00550	Phosphopantetheine attachment site	6/6
PF00501	AMP-binding enzyme	6/6
PF00330	Aconitase family (aconitate hydratase)	6/6
PF00296	Luciferase-like monooxygenase	6/6
PF00285	Citrate synthase, C-terminal domain	6/6
PF07690	Major Facilitator Superfamily	5/6
PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	5/6
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	4/6
PF00072	Response regulator receiver domain	4/6
PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	3/6

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_202193	280.2962962962962	23	None found	0.06 +- 0.15	True	17 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02746 PF02826 PF07690 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0
Streptomyces_RBGC_686663	166.039603960396	24	None found	0.06 +- 0.15	True	20 PF00072 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02518 PF02746 PF02786 PF02826 PF07690 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0
Streptomyces_RBGC_648333	308.4745762711865	25	None found	0.03 +- 0.09	True	20 PF00072 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02518 PF02746 PF02786 PF02826 PF07690 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0
Streptomyces_RBGC_271481	171.99999999999991	21	None found	0.05 +- 0.13	True	18 PF00072 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02518 PF02746 PF07690 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0
Streptomyces_RBGC_374442	179.78723404255322	24	None found	0.06 +- 0.16	True	20 PF00072 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02518 PF02746 PF02786 PF02826 PF07690 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0
Streptomyces_RBGC_48165	102.61363636363635	21	t1pks-nrps (total overlap)	0.07 +- 0.17	True	17 PF00285 PF00296 PF00330 PF00501 PF00550 PF00694 PF01613 PF02222 PF02746 PF02826 PF13193 PF13378 PF13535 PF18603 TIGR01341 TIGR01733 TIGR03860	0