jaccard_groups_4538

jaccard_groups_4538

Entry name: jaccard_groups_4538
Common denominator: Jaccard index of protein domains
Number of operons: 3
Average COG: 0.13 +- 0.27

Common protein domains
Domain ID	Domain name	Times found
TIGR03945	2,3-diaminopropionate biosynthesis protein SbnA	3/3
TIGR03944	2,3-diaminopropionate biosynthesis protein SbnB	3/3
TIGR01733	amino acid adenylation domain	3/3
PF16197	Ketoacyl-synthetase C-terminal extension	3/3
PF13193	AMP-binding enzyme C-terminal domain	3/3
PF02801	Beta-ketoacyl synthase, C-terminal domain	3/3
PF02423	Ornithine cyclodeaminase/mu-crystallin family	3/3
PF00975	Thioesterase domain	3/3
PF00668	Condensation domain	3/3
PF00664	ABC transporter transmembrane region	3/3
PF00550	Phosphopantetheine attachment site	3/3
PF00501	AMP-binding enzyme	3/3
PF00291	Pyridoxal-phosphate dependent enzyme	3/3
PF00155	Aminotransferase class I and II	3/3
PF00109	Beta-ketoacyl synthase, N-terminal domain	3/3
PF00005	ABC transporter	3/3
TIGR00223	aspartate 1-decarboxylase	2/3
PF13847	Methyltransferase domain	2/3
PF13535	ATP-grasp domain	2/3
PF13450	NAD(P)-binding Rossmann-like domain	2/3
PF13358	DDE superfamily endonuclease	2/3
PF03621	MbtH-like protein	2/3
PF02771	Acyl-CoA dehydrogenase, N-terminal domain	2/3
PF02770	Acyl-CoA dehydrogenase, middle domain	2/3
PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	2/3
PF02261	Aspartate decarboxylase	2/3
PF00441	Acyl-CoA dehydrogenase, C-terminal domain	2/3
PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_109249	797.9381443298969	36	terpene-nrps (total overlap)	0.06 +- 0.19	True	28 PF00005 PF00109 PF00155 PF00185 PF00291 PF00441 PF00501 PF00550 PF00664 PF00668 PF00975 PF02261 PF02423 PF02729 PF02770 PF02771 PF02801 PF03621 PF13193 PF13358 PF13450 PF13535 PF13847 PF16197 TIGR00223 TIGR01733 TIGR03944 TIGR03945	0
Streptomyces_RBGC_401585	87.30627306273065	24	nrps (total overlap)	0.16 +- 0.29	True	18 PF00005 PF00109 PF00155 PF00291 PF00501 PF00550 PF00664 PF00668 PF00975 PF01609 PF02423 PF02801 PF13193 PF13340 PF16197 TIGR01733 TIGR03944 TIGR03945	0
Streptomyces_RBGC_154375	266.66666666666674	36	terpene-nrps (total overlap)	0.18 +- 0.31	True	28 PF00005 PF00109 PF00155 PF00185 PF00291 PF00441 PF00501 PF00550 PF00664 PF00668 PF00975 PF02261 PF02423 PF02729 PF02770 PF02771 PF02801 PF03621 PF13193 PF13358 PF13450 PF13535 PF13847 PF16197 TIGR00223 TIGR01733 TIGR03944 TIGR03945	0