jaccard_groups_5224

jaccard_groups_5224

Back to index

Entry name: jaccard_groups_5224
Common denominator: Jaccard index of protein domains
Number of operons: 3
Average COG: 0.01 +- 0.00

Common protein domains
Domain ID	Domain name	Times found
PF05402	Coenzyme PQQ synthesis protein D (PqqD)	3/3
PF01928	CYTH domain	3/3
PF01523	Putative modulator of DNA gyrase	3/3
PF01061	ABC-2 type transporter	3/3
PF00196	Bacterial regulatory proteins, luxR family	3/3
PF00005	ABC transporter	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_513056	1300.0	19	t1pks-nrps (total overlap)	0.01 +- 0.00	True	6 PF00005 PF00196 PF01061 PF01523 PF01928 PF05402	1
Streptomyces_RBGC_303825	1290.0	19	t1pks-nrps (total overlap)	0.01 +- 0.00	True	6 PF00005 PF00196 PF01061 PF01523 PF01928 PF05402	1
Streptomyces_RBGC_698046	1290.0	19	t1pks-nrps (total overlap)	0.01 +- 0.00	True	6 PF00005 PF00196 PF01061 PF01523 PF01928 PF05402	1