jaccard_groups_994

jaccard_groups_994

Back to index

Entry name: jaccard_groups_994
Common denominator: Jaccard index of protein domains
Number of operons: 7
Average COG: 0.03 +- 0.11

Common protein domains
Domain ID	Domain name	Times found
TIGR01558	putative phage terminase, small subunit, P27 family	7/7
TIGR01554	phage major capsid protein, HK97 family	7/7
TIGR01543	phage prohead protease, HK97 family	7/7
TIGR01537	phage portal protein, HK97 family	7/7
PF10145	Phage-related minor tail protein	7/7
PF05119	Phage terminase, small subunit	7/7
PF05065	Phage capsid family	7/7
PF04860	Phage portal protein	7/7
PF04586	Caudovirus prohead serine protease	7/7
PF03354	Phage Terminase	7/7
PF01510	N-acetylmuramoyl-L-alanine amidase	6/7
PF01381	Helix-turn-helix	6/7
PF16945	Putative lactococcus lactis phage r1t holin	4/7
PF13229	Right handed beta helix region	4/7
PF01476	LysM domain	4/7
PF01464	Transglycosylase SLT domain	4/7

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_606126	390.9090909090909	60	None found	0.01 +- 0.01	True	18 PF00271 PF01381 PF01391 PF01510 PF01844 PF03354 PF04542 PF04586 PF04851 PF04860 PF05065 PF05119 PF10145 PF14594 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0
Streptomyces_RBGC_104861	196.57142857142858	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0
Streptomyces_RBGC_424967	257.9999999999999	34	None found	0.01 +- 0.00	True	13 PF01183 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13560 TIGR01537 TIGR01543 TIGR01554 TIGR01558 TIGR01760	0
Streptomyces_RBGC_119401	188.0225988700565	42	None found	0.04 +- 0.14	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0
Streptomyces_RBGC_271715	326.5822784810127	60	None found	0.01 +- 0.01	True	18 PF00271 PF01381 PF01391 PF01510 PF01844 PF03354 PF04542 PF04586 PF04851 PF04860 PF05065 PF05119 PF10145 PF14594 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0
Streptomyces_RBGC_306357	196.57142857142856	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0
Streptomyces_RBGC_196636	206.4	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558	0