precursor_groups_1188

Back to index

Entry name: precursor_groups_1188
Common denominator: Precursor BLAST
Number of operons: 4
Average COG: 0.08 +- 0.16

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR03150	beta-ketoacyl-acyl-carrier-protein synthase II	4/4
TIGR00517	acyl carrier protein	4/4
PF13561	Enoyl-(Acyl carrier protein) reductase	4/4
PF13193	AMP-binding enzyme C-terminal domain	4/4
PF07690	Major Facilitator Superfamily	4/4
PF02801	Beta-ketoacyl synthase, C-terminal domain	4/4
PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	4/4
PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	4/4
PF00668	Condensation domain	4/4
PF00550	Phosphopantetheine attachment site	4/4
PF00501	AMP-binding enzyme	4/4
PF00205	Thiamine pyrophosphate enzyme, central domain	4/4
PF00171	Aldehyde dehydrogenase family	4/4
PF00155	Aminotransferase class I and II	4/4
PF00109	Beta-ketoacyl synthase, N-terminal domain	4/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_143963	33.47027027027027	18	t1pks-nrps (total overlap)	0.18 +- 0.31	True	15 PF00109 PF00155 PF00171 PF00205 PF00501 PF00550 PF00668 PF02775 PF02776 PF02801 PF07690 PF13193 PF13561 TIGR00517 TIGR03150
Streptomyces_RBGC_587416	359.99999999999994	21	nrps (total overlap)	0.03 +- 0.04	True	15 PF00109 PF00155 PF00171 PF00205 PF00501 PF00550 PF00668 PF02775 PF02776 PF02801 PF07690 PF13193 PF13561 TIGR00517 TIGR03150
Streptomyces_RBGC_527747	116.83018867924527	18	bacteriocin-t3pks-terpene-nrps (total overlap)	0.05 +- 0.04	True	15 PF00109 PF00155 PF00171 PF00205 PF00501 PF00550 PF00668 PF02775 PF02776 PF02801 PF07690 PF13193 PF13561 TIGR00517 TIGR03150
Streptomyces_RBGC_310599	212.72727272727275	20	nrps-terpene-otherks (total overlap)	0.06 +- 0.02	True	15 PF00109 PF00155 PF00171 PF00205 PF00501 PF00550 PF00668 PF02775 PF02776 PF02801 PF07690 PF13193 PF13561 TIGR00517 TIGR03150