precursor_groups_12417

precursor_groups_12417

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Entry name: precursor_groups_12417
Common denominator: Precursor BLAST
Number of operons: 7
Average COG: 0.13 +- 0.25

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02980	RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	7/7
TIGR01733	amino acid adenylation domain	7/7
TIGR01720	non-ribosomal peptide synthase domain TIGR01720	7/7
PF17196	Protein of unknown function (DUF5133)	7/7
PF13193	AMP-binding enzyme C-terminal domain	7/7
PF12401	Protein of unknown function (DUF2662)	7/7
PF04545	Sigma-70, region 4	7/7
PF04542	Sigma-70 region 2	7/7
PF04539	Sigma-70 region 3	7/7
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	7/7
PF01061	ABC-2 type transporter	7/7
PF00672	HAMP domain	7/7
PF00668	Condensation domain	7/7
PF00550	Phosphopantetheine attachment site	7/7
PF00512	His Kinase A (phospho-acceptor) domain	7/7
PF00501	AMP-binding enzyme	7/7
PF00486	Transcriptional regulatory protein, C terminal	7/7
PF00072	Response regulator receiver domain	7/7
PF00005	ABC transporter	7/7

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_147473	86.98850574712644	22	t1pks-lassopeptide-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_241438	420.44444444444446	22	t1pks-nrps (total overlap)	0.04 +- 0.02	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_533710	86.98850574712644	22	t1pks-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_156496	117.0	24	t1pks-nrps (total overlap)	0.15 +- 0.27	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_497808	86.98850574712644	22	t1pks-lassopeptide-nrps (total overlap)	0.18 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_448655	158.8888888888889	22	t1pks-nrps (total overlap)	0.10 +- 0.28	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0
Streptomyces_RBGC_468687	493.5652173913044	22	t1pks-lassopeptide-nrps (total overlap)	0.03 +- 0.03	True	19 PF00005 PF00072 PF00486 PF00501 PF00512 PF00550 PF00668 PF00672 PF01061 PF02518 PF04539 PF04542 PF04545 PF12401 PF13193 PF17196 TIGR01720 TIGR01733 TIGR02980	0