precursor_groups_13190

Back to index

Entry name: precursor_groups_13190
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.05 +- 0.05

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase	3/3
PF08757	CotH kinase protein	3/3
PF04138	GtrA-like protein	3/3
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	3/3
PF01557	Fumarylacetoacetate (FAA) hydrolase family	3/3
PF00672	HAMP domain	3/3
PF00535	Glycosyl transferase family 2	3/3
PF00512	His Kinase A (phospho-acceptor) domain	3/3
PF00486	Transcriptional regulatory protein, C terminal	3/3
PF00072	Response regulator receiver domain	3/3
PF16316	Domain of unknown function (DUF4956)	2/3
PF09359	VTC domain	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_143071	341.4705882352941	21	None found	0.03 +- 0.03	True	12 PF00072 PF00486 PF00512 PF00535 PF00672 PF01557 PF02518 PF04138 PF08757 PF09359 PF13231 PF16316
Streptomyces_RBGC_497451	306.88524590163934	15	None found	0.06 +- 0.05	True	10 PF00072 PF00486 PF00512 PF00535 PF00672 PF01557 PF02518 PF04138 PF08757 PF13231
Streptomyces_RBGC_291166	249.6774193548387	22	None found	0.07 +- 0.05	True	12 PF00072 PF00486 PF00512 PF00535 PF00672 PF01557 PF02518 PF04138 PF08757 PF09359 PF13231 PF16316