precursor_groups_13985

Back to index

Entry name: precursor_groups_13985
Common denominator: Precursor BLAST
Number of operons: 6
Average COG: 0.19 +- 0.20

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13517	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	6/6
PF13302	Acetyltransferase (GNAT) domain	6/6
PF07690	Major Facilitator Superfamily	6/6
PF00089	Trypsin	6/6
TIGR00045	glycerate kinase	5/6
PF12867	DinB superfamily	5/6
PF02595	Glycerate kinase family	5/6
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	5/6
PF00939	Sodium:sulfate symporter transmembrane region	5/6
PF00672	HAMP domain	5/6
PF00512	His Kinase A (phospho-acceptor) domain	5/6
PF00486	Transcriptional regulatory protein, C terminal	5/6
PF00072	Response regulator receiver domain	5/6

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_324562	35.18181818181818	18	None found	0.09 +- 0.12	True	7 PF00089 PF05593 PF07690 PF13302 PF13517 TIGR01643 TIGR03696
Streptomyces_RBGC_632298	30.472440944881885	21	None found	0.20 +- 0.14	True	13 PF00072 PF00089 PF00486 PF00512 PF00672 PF00939 PF02518 PF02595 PF07690 PF12867 PF13302 PF13517 TIGR00045
Streptomyces_RBGC_324484	30.472440944881885	21	None found	0.20 +- 0.14	True	13 PF00072 PF00089 PF00486 PF00512 PF00672 PF00939 PF02518 PF02595 PF07690 PF12867 PF13302 PF13517 TIGR00045
Streptomyces_RBGC_572324	28.988764044943817	21	None found	0.21 +- 0.15	True	13 PF00072 PF00089 PF00486 PF00512 PF00672 PF00939 PF02518 PF02595 PF07690 PF12867 PF13302 PF13517 TIGR00045
Streptomyces_RBGC_577913	29.5625	22	None found	0.20 +- 0.27	True	14 PF00072 PF00089 PF00144 PF00486 PF00512 PF00672 PF00939 PF02518 PF02595 PF07690 PF12867 PF13302 PF13517 TIGR00045
Streptomyces_RBGC_215101	59.125	23	None found	0.20 +- 0.27	True	14 PF00072 PF00089 PF00144 PF00486 PF00512 PF00672 PF00939 PF02518 PF02595 PF07690 PF12867 PF13302 PF13517 TIGR00045