precursor_groups_15931

Back to index

Entry name: precursor_groups_15931
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.03 +- 0.03

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF14099	Polysaccharide lyase	2/2
PF13377	Periplasmic binding protein-like domain	2/2
PF13360	PQQ-like domain	2/2
PF08220	DeoR-like helix-turn-helix domain	2/2
PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	2/2
PF01547	Bacterial extracellular solute-binding protein	2/2
PF00528	Binding-protein-dependent transport system inner membrane component	2/2
PF06283	Trehalose utilisation	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_359883	496.1538461538461	20	None found	0.02 +- 0.02	True	7 PF00528 PF01547 PF02826 PF08220 PF13360 PF13377 PF14099	1
Streptomyces_RBGC_195585	265.3061224489795	20	None found	0.04 +- 0.03	True	8 PF00528 PF01547 PF02826 PF06283 PF08220 PF13360 PF13377 PF14099	1