precursor_groups_15997

Back to index

Entry name: precursor_groups_15997
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.10 +- 0.11

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13407	Periplasmic binding protein domain	3/3
PF08376	Nitrate and nitrite sensing	3/3
PF05331	Protein of unknown function (DUF742)	3/3
PF03259	Roadblock/LC7 domain	3/3
PF03029	Conserved hypothetical ATP binding protein	3/3
PF00672	HAMP domain	3/3
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_649690	15.47619047619048	16	bacteriocin-t2pks-terpene-otherks (total overlap)	0.13 +- 0.12	True	6 PF00672 PF03029 PF03259 PF05331 PF08376 PF13407
Streptomyces_RBGC_610482	22.296296296296294	18	terpene (total overlap)	0.09 +- 0.10	True	7 PF00672 PF02518 PF03029 PF03259 PF05331 PF08376 PF13407
Streptomyces_RBGC_305259	31.744186046511633	18	terpene (total overlap)	0.09 +- 0.11	True	8 PF00672 PF02518 PF03029 PF03067 PF03259 PF05331 PF08376 PF13407