precursor_groups_17023

Back to index

Entry name: precursor_groups_17023
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.10 +- 0.11

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF07690	Major Facilitator Superfamily	2/2
PF00291	Pyridoxal-phosphate dependent enzyme	2/2
TIGR01972	proton-translocating NADH-quinone oxidoreductase, chain M	1/2
PF14759	Reductase C-terminal	1/2
PF14016	Protein of unknown function (DUF4232)	1/2
PF13370	4Fe-4S single cluster domain of Ferredoxin I	1/2
PF12146	Serine aminopeptidase, S33	1/2
PF07992	Pyridine nucleotide-disulphide oxidoreductase	1/2
PF07732	Multicopper oxidase	1/2
PF07731	Multicopper oxidase	1/2
PF01557	Fumarylacetoacetate (FAA) hydrolase family	1/2
PF01545	Cation efflux family	1/2
PF01022	Bacterial regulatory protein, arsR family	1/2
PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	1/2
PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3	1/2
PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6	1/2
PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L	1/2
PF00394	Multicopper oxidase	1/2
PF00361	Proton-conducting membrane transporter	1/2
PF00146	NADH dehydrogenase	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_214799	95.78947368421053	21	None found	0.15 +- 0.13	True	11 PF00291 PF00903 PF01022 PF01545 PF01557 PF07690 PF07992 PF12146 PF13370 PF14016 PF14759	0
Streptomyces_RBGC_351717	266.3414634146341	23	None found	0.05 +- 0.06	True	11 PF00146 PF00291 PF00361 PF00394 PF00420 PF00499 PF00507 PF07690 PF07731 PF07732 TIGR01972	0