precursor_groups_18939

precursor_groups_18939

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Entry name: precursor_groups_18939
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.03 +- 0.04

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF17853	GGDEF-like domain	5/5
PF16483	Beta-1,3-glucanase	5/5
PF13556	PucR C-terminal helix-turn-helix domain	5/5
PF13450	NAD(P)-binding Rossmann-like domain	5/5
PF13193	AMP-binding enzyme C-terminal domain	5/5
PF12077	Transmembrane protein of unknown function (DUF3556)	5/5
PF06314	Acetoacetate decarboxylase (ADC)	5/5
PF03466	LysR substrate binding domain	5/5
PF02771	Acyl-CoA dehydrogenase, N-terminal domain	5/5
PF02770	Acyl-CoA dehydrogenase, middle domain	5/5
PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	5/5
PF02515	CoA-transferase family III	5/5
PF00795	Carbon-nitrogen hydrolase	5/5
PF00754	F5/8 type C domain	5/5
PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	5/5
PF00501	AMP-binding enzyme	5/5
PF00441	Acyl-CoA dehydrogenase, C-terminal domain	5/5
PF00378	Enoyl-CoA hydratase/isomerase	5/5
PF00324	Amino acid permease	5/5
PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	5/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_673820	469.4444444444446	24	None found	0.02 +- 0.02	True	20 PF00126 PF00324 PF00378 PF00441 PF00501 PF00725 PF00754 PF00795 PF02515 PF02737 PF02770 PF02771 PF03466 PF06314 PF12077 PF13193 PF13450 PF13556 PF16483 PF17853	0
Streptomyces_RBGC_140730	551.8333333333333	25	None found	0.02 +- 0.02	True	20 PF00126 PF00324 PF00378 PF00441 PF00501 PF00725 PF00754 PF00795 PF02515 PF02737 PF02770 PF02771 PF03466 PF06314 PF12077 PF13193 PF13450 PF13556 PF16483 PF17853	0
Streptomyces_RBGC_227328	189.88764044943818	24	None found	0.05 +- 0.05	True	20 PF00126 PF00324 PF00378 PF00441 PF00501 PF00725 PF00754 PF00795 PF02515 PF02737 PF02770 PF02771 PF03466 PF06314 PF12077 PF13193 PF13450 PF13556 PF16483 PF17853	0
Streptomyces_RBGC_449797	266.19047619047615	24	None found	0.04 +- 0.04	True	20 PF00126 PF00324 PF00378 PF00441 PF00501 PF00725 PF00754 PF00795 PF02515 PF02737 PF02770 PF02771 PF03466 PF06314 PF12077 PF13193 PF13450 PF13556 PF16483 PF17853	0
Streptomyces_RBGC_647947	246.6176470588235	24	None found	0.04 +- 0.04	True	20 PF00126 PF00324 PF00378 PF00441 PF00501 PF00725 PF00754 PF00795 PF02515 PF02737 PF02770 PF02771 PF03466 PF06314 PF12077 PF13193 PF13450 PF13556 PF16483 PF17853	0