precursor_groups_19541

precursor_groups_19541

Back to index

Entry name: precursor_groups_19541
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.09 +- 0.06

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR00797	MATE efflux family protein	5/5
PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	5/5
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	5/5
PF02423	Ornithine cyclodeaminase/mu-crystallin family	5/5
PF01554	MatE	5/5
PF00291	Pyridoxal-phosphate dependent enzyme	5/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_3203	96.29629629629629	16	bacteriocin (partial overlap)	0.04 +- 0.03	True	6 PF00291 PF01554 PF02423 PF02668 PF02784 TIGR00797	0
Streptomyces_RBGC_520772	38.235294117647065	16	bacteriocin (partial overlap)	0.10 +- 0.05	True	6 PF00291 PF01554 PF02423 PF02668 PF02784 TIGR00797	0
Streptomyces_RBGC_146700	35.342465753424655	16	bacteriocin (partial overlap)	0.11 +- 0.07	True	6 PF00291 PF01554 PF02423 PF02668 PF02784 TIGR00797	0
Streptomyces_RBGC_344719	34.4	16	bacteriocin (partial overlap)	0.12 +- 0.06	True	6 PF00291 PF01554 PF02423 PF02668 PF02784 TIGR00797	0
Streptomyces_RBGC_515897	61.904761904761905	16	bacteriocin (partial overlap)	0.06 +- 0.05	True	6 PF00291 PF01554 PF02423 PF02668 PF02784 TIGR00797	0