precursor_groups_21125

Back to index

Entry name: precursor_groups_21125
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.02 +- 0.02

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01733	amino acid adenylation domain	5/5
TIGR01188	daunorubicin resistance ABC transporter, ATP-binding protein	5/5
TIGR00838	argininosuccinate lyase	5/5
PF18603	L-amino acid ligase C-terminal domain 2	5/5
PF18130	ATP-grasp N-terminal domain	5/5
PF14698	Argininosuccinate lyase C-terminal	5/5
PF13535	ATP-grasp domain	5/5
PF13193	AMP-binding enzyme C-terminal domain	5/5
PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)	5/5
PF00975	Thioesterase domain	5/5
PF00550	Phosphopantetheine attachment site	5/5
PF00501	AMP-binding enzyme	5/5
PF00291	Pyridoxal-phosphate dependent enzyme	5/5
PF00288	GHMP kinases N terminal domain	5/5
PF00206	Lyase	5/5
PF00005	ABC transporter	5/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_650540	157.5757575757576	19	t1pks-nrps (total overlap)	0.03 +- 0.03	True	16 PF00005 PF00206 PF00288 PF00291 PF00501 PF00550 PF00975 PF03767 PF13193 PF13535 PF14698 PF18130 PF18603 TIGR00838 TIGR01188 TIGR01733
Streptomyces_RBGC_448334	382.35294117647055	22	t1pks-nrps (total overlap)	0.03 +- 0.03	True	16 PF00005 PF00206 PF00288 PF00291 PF00501 PF00550 PF00975 PF03767 PF13193 PF13535 PF14698 PF18130 PF18603 TIGR00838 TIGR01188 TIGR01733
Streptomyces_RBGC_622523	344.0	19	nrps (total overlap)	0.01 +- 0.01	True	16 PF00005 PF00206 PF00288 PF00291 PF00501 PF00550 PF00975 PF03767 PF13193 PF13535 PF14698 PF18130 PF18603 TIGR00838 TIGR01188 TIGR01733
Streptomyces_RBGC_454467	192.59259259259258	19	nrps (total overlap)	0.03 +- 0.02	True	16 PF00005 PF00206 PF00288 PF00291 PF00501 PF00550 PF00975 PF03767 PF13193 PF13535 PF14698 PF18130 PF18603 TIGR00838 TIGR01188 TIGR01733
Streptomyces_RBGC_712106	192.59259259259258	19	nrps (total overlap)	0.03 +- 0.02	True	16 PF00005 PF00206 PF00288 PF00291 PF00501 PF00550 PF00975 PF03767 PF13193 PF13535 PF14698 PF18130 PF18603 TIGR00838 TIGR01188 TIGR01733