precursor_groups_2244

Back to index

Entry name: precursor_groups_2244
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.04 +- 0.13

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF16945	Putative lactococcus lactis phage r1t holin	5/5
TIGR01558	putative phage terminase, small subunit, P27 family	4/5
TIGR01554	phage major capsid protein, HK97 family	4/5
TIGR01543	phage prohead protease, HK97 family	4/5
TIGR01537	phage portal protein, HK97 family	4/5
PF13229	Right handed beta helix region	4/5
PF10145	Phage-related minor tail protein	4/5
PF05119	Phage terminase, small subunit	4/5
PF05065	Phage capsid family	4/5
PF04860	Phage portal protein	4/5
PF04586	Caudovirus prohead serine protease	4/5
PF03354	Phage Terminase	4/5
PF01510	N-acetylmuramoyl-L-alanine amidase	4/5
PF01476	LysM domain	4/5
PF01464	Transglycosylase SLT domain	4/5
PF01381	Helix-turn-helix	4/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_136845	206.34920634920633	56	None found	0.03 +- 0.04	True	11 PF00293 PF01183 PF01391 PF04883 PF05133 PF11367 PF13227 PF13560 PF16461 PF16945 TIGR01725
Streptomyces_RBGC_104861	196.57142857142858	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558
Streptomyces_RBGC_196636	206.4	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558
Streptomyces_RBGC_306357	196.57142857142856	42	None found	0.04 +- 0.15	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558
Streptomyces_RBGC_119401	188.0225988700565	42	None found	0.04 +- 0.14	True	16 PF01381 PF01464 PF01476 PF01510 PF03354 PF04586 PF04860 PF05065 PF05119 PF10145 PF13229 PF16945 TIGR01537 TIGR01543 TIGR01554 TIGR01558