precursor_groups_2388

precursor_groups_2388

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Entry name: precursor_groups_2388
Common denominator: Precursor BLAST
Number of operons: 6
Average COG: 0.09 +- 0.19

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01525	heavy metal translocating P-type ATPase	6/6
TIGR00802	transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family	6/6
PF07690	Major Facilitator Superfamily	6/6
PF04314	Copper chaperone PCu(A)C	6/6
PF03824	High-affinity nickel-transport protein	6/6
PF00702	haloacid dehalogenase-like hydrolase	6/6
PF00403	Heavy-metal-associated domain	6/6
PF00122	E1-E2 ATPase	6/6
TIGR02937	RNA polymerase sigma factor, sigma-70 family	5/6
PF08281	Sigma-70, region 4	5/6
PF05118	Aspartyl/Asparaginyl beta-hydroxylase	5/6
PF04542	Sigma-70 region 2	5/6
TIGR01733	amino acid adenylation domain	4/6
PF14237	GYF domain 2	4/6
PF13421	SPFH domain-Band 7 family	4/6
PF13193	AMP-binding enzyme C-terminal domain	4/6
PF10862	FcoT-like thioesterase domain	4/6
PF07993	Male sterility protein	4/6
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	4/6
PF00668	Condensation domain	4/6
PF00550	Phosphopantetheine attachment site	4/6
PF00501	AMP-binding enzyme	4/6
TIGR01746	thioester reductase domain	3/6
PF13738	Pyridine nucleotide-disulphide oxidoreductase	3/6
PF01070	FMN-dependent dehydrogenase	3/6
PF00067	Cytochrome P450	3/6

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_534428	321.2355212355213	31	t1pks-nrps (total overlap)	0.10 +- 0.22	True	26 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF08541 PF08545 PF10862 PF13193 PF13421 PF14237 TIGR00747 TIGR00802 TIGR01525 TIGR01733 TIGR01746 TIGR02937	0
Streptomyces_RBGC_140490	169.0	24	nrps (partial overlap)	0.12 +- 0.26	True	13 PF00067 PF00122 PF00403 PF00702 PF01070 PF03824 PF04314 PF07690 PF13421 PF13738 PF14237 TIGR00802 TIGR01525	0
Streptomyces_RBGC_299047	184.86614173228347	24	t1pks-nrps (total overlap)	0.08 +- 0.13	True	21 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF10862 PF13193 TIGR00802 TIGR01525 TIGR01733 TIGR01746 TIGR02937	0
Streptomyces_RBGC_22994	934.3750000000001	35	nrps (partial overlap)	0.06 +- 0.21	True	27 PF00067 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF01070 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF08541 PF08545 PF10862 PF13193 PF13421 PF13738 PF14237 TIGR00802 TIGR01525 TIGR01733 TIGR02937	0
Streptomyces_RBGC_150584	116.64893617021276	28	phenazine-nrps (total overlap)	0.13 +- 0.18	True	24 PF00005 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF01032 PF01497 PF02668 PF03824 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF10862 PF13193 TIGR00802 TIGR01525 TIGR01733 TIGR01746 TIGR02937	0
Streptomyces_RBGC_408458	844.3636363636361	26	nrps (partial overlap)	0.04 +- 0.08	True	17 PF00067 PF00122 PF00403 PF00702 PF01070 PF03824 PF04314 PF04542 PF05118 PF07690 PF08281 PF13421 PF13738 PF14237 TIGR00802 TIGR01525 TIGR02937	0