precursor_groups_2393

Back to index

Entry name: precursor_groups_2393
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.18 +- 0.15

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF00005	ABC transporter	2/2
PF18368	Exo-beta-D-glucosaminidase Ig-fold domain	1/2
PF17786	Mannosidase Ig/CBM-like domain	1/2
PF17765	MmyB-like transcription regulator ligand binding domain	1/2
PF13560	Helix-turn-helix domain	1/2
PF11706	CGNR zinc finger	1/2
PF07336	Putative stress-induced transcription regulator	1/2
PF02225	PA domain	1/2
PF00754	F5/8 type C domain	1/2
PF00703	Glycosyl hydrolases family 2	1/2
PF00171	Aldehyde dehydrogenase family	1/2
PF00082	Subtilase family	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_599076	69.10714285714286	16	None found	0.13 +- 0.10	True	7 PF00005 PF00703 PF00754 PF07336 PF11706 PF17786 PF18368	0
Streptomyces_RBGC_47252	26.3265306122449	17	terpene (partial overlap)	0.23 +- 0.18	True	6 PF00005 PF00082 PF00171 PF02225 PF13560 PF17765	0