precursor_groups_24702

precursor_groups_24702

Back to index

Entry name: precursor_groups_24702
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.06 +- 0.10

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02426	3-carboxy-cis,cis-muconate cycloisomerase	3/3
PF13714	Phosphoenolpyruvate phosphomutase	3/3
PF13454	FAD-NAD(P)-binding	3/3
PF10397	Adenylosuccinate lyase C-terminus	3/3
PF01474	Class-II DAHP synthetase family	3/3
PF00206	Lyase	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_516403	27.46478873239437	15	other (partial overlap)	0.11 +- 0.13	True	6 PF00206 PF01474 PF10397 PF13454 PF13714 TIGR02426	0
Streptomyces_RBGC_569884	69.10714285714286	15	other (partial overlap)	0.04 +- 0.07	True	6 PF00206 PF01474 PF10397 PF13454 PF13714 TIGR02426	0
Streptomyces_RBGC_140358	78.0	15	other (partial overlap)	0.04 +- 0.06	True	6 PF00206 PF01474 PF10397 PF13454 PF13714 TIGR02426	0