precursor_groups_29716

Back to index

Entry name: precursor_groups_29716
Common denominator: Precursor BLAST
Number of operons: 4
Average COG: 0.06 +- 0.17

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02412	aminopeptidase N	4/4
TIGR01686	FkbH domain	4/4
PF18603	L-amino acid ligase C-terminal domain 2	4/4
PF18130	ATP-grasp N-terminal domain	4/4
PF13535	ATP-grasp domain	4/4
PF13434	L-lysine 6-monooxygenase (NADPH-requiring)	4/4
PF11838	ERAP1-like C-terminal domain	4/4
PF09334	tRNA synthetases class I (M)	4/4
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	4/4
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	4/4
PF07883	Cupin domain	4/4
PF07690	Major Facilitator Superfamily	4/4
PF02274	Amidinotransferase	4/4
PF02195	ParB-like nuclease domain	4/4
PF01433	Peptidase family M1 domain	4/4
PF01266	FAD dependent oxidoreductase	4/4
PF00999	Sodium/hydrogen exchanger family	4/4
PF00550	Phosphopantetheine attachment site	4/4
PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle	4/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_100132	171.99999999999997	29	otherks (total overlap)	0.05 +- 0.14	True	19 PF00496 PF00550 PF00999 PF01266 PF01433 PF02195 PF02274 PF07690 PF07883 PF08541 PF08545 PF09334 PF11838 PF13434 PF13535 PF18130 PF18603 TIGR01686 TIGR02412
Streptomyces_RBGC_198623	155.08771929824564	28	otherks (total overlap)	0.05 +- 0.15	True	19 PF00496 PF00550 PF00999 PF01266 PF01433 PF02195 PF02274 PF07690 PF07883 PF08541 PF08545 PF09334 PF11838 PF13434 PF13535 PF18130 PF18603 TIGR01686 TIGR02412
Streptomyces_RBGC_122196	115.55555555555554	28	otherks (total overlap)	0.07 +- 0.23	True	19 PF00496 PF00550 PF00999 PF01266 PF01433 PF02195 PF02274 PF07690 PF07883 PF08541 PF08545 PF09334 PF11838 PF13434 PF13535 PF18130 PF18603 TIGR01686 TIGR02412
Streptomyces_RBGC_240536	127.02290076335878	27	otherks (total overlap)	0.06 +- 0.16	True	19 PF00496 PF00550 PF00999 PF01266 PF01433 PF02195 PF02274 PF07690 PF07883 PF08541 PF08545 PF09334 PF11838 PF13434 PF13535 PF18130 PF18603 TIGR01686 TIGR02412