precursor_groups_32542

Back to index

Entry name: precursor_groups_32542
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.02 +- 0.02

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR00747	3-oxoacyl-[acyl-carrier-protein] synthase III	3/3
PF17837	4'-phosphopantetheinyl transferase N-terminal domain	3/3
PF13561	Enoyl-(Acyl carrier protein) reductase	3/3
PF13193	AMP-binding enzyme C-terminal domain	3/3
PF12146	Serine aminopeptidase, S33	3/3
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	3/3
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	3/3
PF07690	Major Facilitator Superfamily	3/3
PF05138	Phenylacetic acid catabolic protein	3/3
PF04055	Radical SAM superfamily	3/3
PF02801	Beta-ketoacyl synthase, C-terminal domain	3/3
PF01648	4'-phosphopantetheinyl transferase superfamily	3/3
PF00550	Phosphopantetheine attachment site	3/3
PF00501	AMP-binding enzyme	3/3
PF00109	Beta-ketoacyl synthase, N-terminal domain	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_698812	1289.9999999999998	23	ladderane-nrps (total overlap)	0.01 +- 0.01	True	15 PF00109 PF00501 PF00550 PF01648 PF02801 PF04055 PF05138 PF07690 PF08541 PF08545 PF12146 PF13193 PF13561 PF17837 TIGR00747	1
Streptomyces_RBGC_674182	311.4878048780488	22	ladderane-nrps (total overlap)	0.03 +- 0.02	True	15 PF00109 PF00501 PF00550 PF01648 PF02801 PF04055 PF05138 PF07690 PF08541 PF08545 PF12146 PF13193 PF13561 PF17837 TIGR00747	1
Streptomyces_RBGC_237753	311.4878048780488	22	ladderane-nrps (total overlap)	0.03 +- 0.02	True	15 PF00109 PF00501 PF00550 PF01648 PF02801 PF04055 PF05138 PF07690 PF08541 PF08545 PF12146 PF13193 PF13561 PF17837 TIGR00747	1