precursor_groups_35254

Back to index

Entry name: precursor_groups_35254
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.01 +- 0.01

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13814	Replication-relaxation	3/3
PF13406	Transglycosylase SLT domain	3/3
PF12846	AAA-like domain	3/3
PF12642	Conjugative transposon protein TcpC	3/3
PF08666	SAF domain	3/3
PF07811	TadE-like protein	3/3
PF00877	NlpC/P60 family	3/3
PF00482	Type II secretion system (T2SS), protein F	3/3
PF00437	Type II/IV secretion system protein	3/3
PF01476	LysM domain	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_334508	3596.3636363636356	36	None found	0.01 +- 0.01	True	10 PF00437 PF00482 PF00877 PF01476 PF07811 PF08666 PF12642 PF12846 PF13406 PF13814
Streptomyces_RBGC_244036	3596.363636363636	36	None found	0.01 +- 0.01	True	10 PF00437 PF00482 PF00877 PF01476 PF07811 PF08666 PF12642 PF12846 PF13406 PF13814
Streptomyces_RBGC_79954	5200.0	34	None found	0.01 +- 0.00	True	9 PF00437 PF00482 PF00877 PF07811 PF08666 PF12642 PF12846 PF13406 PF13814