precursor_groups_37210

Back to index

Entry name: precursor_groups_37210
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.05 +- 0.16

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR03026	nucleotide sugar dehydrogenase	2/2
TIGR01733	amino acid adenylation domain	2/2
PF18603	L-amino acid ligase C-terminal domain 2	2/2
PF18130	ATP-grasp N-terminal domain	2/2
PF13535	ATP-grasp domain	2/2
PF13469	Sulfotransferase family	2/2
PF13193	AMP-binding enzyme C-terminal domain	2/2
PF07690	Major Facilitator Superfamily	2/2
PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	2/2
PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	2/2
PF02615	Malate/L-lactate dehydrogenase	2/2
PF01522	Polysaccharide deacetylase	2/2
PF01408	Oxidoreductase family, NAD-binding Rossmann fold	2/2
PF01261	Xylose isomerase-like TIM barrel	2/2
PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain	2/2
PF00668	Condensation domain	2/2
PF00550	Phosphopantetheine attachment site	2/2
PF00501	AMP-binding enzyme	2/2
PF00196	Bacterial regulatory proteins, luxR family	2/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_315650	143.04950495049505	24	nrps (total overlap)	0.06 +- 0.17	True	19 PF00196 PF00501 PF00550 PF00668 PF00984 PF01261 PF01408 PF01522 PF02615 PF03720 PF03721 PF07690 PF13193 PF13469 PF13535 PF18130 PF18603 TIGR01733 TIGR03026	0
Streptomyces_RBGC_391203	165.45454545454552	24	nrps (total overlap)	0.05 +- 0.15	True	19 PF00196 PF00501 PF00550 PF00668 PF00984 PF01261 PF01408 PF01522 PF02615 PF03720 PF03721 PF07690 PF13193 PF13469 PF13535 PF18130 PF18603 TIGR01733 TIGR03026	0