precursor_groups_38581

Back to index

Entry name: precursor_groups_38581
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.03 +- 0.10

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01179	UDP-glucose 4-epimerase GalE	3/3
PF16363	GDP-mannose 4,6 dehydratase	3/3
PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	3/3
PF13692	Glycosyl transferases group 1	3/3
PF13489	Methyltransferase domain	3/3
PF13370	4Fe-4S single cluster domain of Ferredoxin I	3/3
PF12708	Pectate lyase superfamily protein	3/3
PF07883	Cupin domain	3/3
PF04101	Glycosyltransferase family 28 C-terminal domain	3/3
PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase	3/3
PF02566	OsmC-like protein	3/3
PF01979	Amidohydrolase family	3/3
PF01053	Cys/Met metabolism PLP-dependent enzyme	3/3
PF00664	ABC transporter transmembrane region	3/3
PF00155	Aminotransferase class I and II	3/3
PF00067	Cytochrome P450	3/3
PF00005	ABC transporter	3/3
PF13641	Glycosyltransferase like family 2	2/3
PF03704	Bacterial transcriptional activator domain	2/3
PF00486	Transcriptional regulatory protein, C terminal	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_637483	3869.9999999999995	32	None found	0.01 +- 0.02	True	17 PF00005 PF00067 PF00155 PF00664 PF01053 PF01979 PF02566 PF03446 PF04101 PF07883 PF12708 PF13370 PF13489 PF13692 PF14833 PF16363 TIGR01179
Streptomyces_RBGC_700479	2189.3142857142852	34	None found	0.02 +- 0.06	True	21 PF00005 PF00067 PF00155 PF00486 PF00664 PF00931 PF01053 PF01979 PF02566 PF03446 PF03704 PF04101 PF07883 PF12708 PF13370 PF13489 PF13641 PF13692 PF14833 PF16363 TIGR01179
Streptomyces_RBGC_458484	1087.6056338028172	29	None found	0.05 +- 0.15	True	20 PF00005 PF00067 PF00155 PF00486 PF00664 PF01053 PF01979 PF02566 PF03446 PF03704 PF04101 PF07883 PF12708 PF13370 PF13489 PF13641 PF13692 PF14833 PF16363 TIGR01179