precursor_groups_39634

Back to index

Entry name: precursor_groups_39634
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.18 +- 0.13

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF16353	Domain of unknown function(DUF4981)	2/2
PF13412	Winged helix-turn-helix DNA-binding	2/2
PF04030	D-arabinono-1,4-lactone oxidase	2/2
PF02929	Beta galactosidase small chain	2/2
PF02837	Glycosyl hydrolases family 2, sugar binding domain	2/2
PF02836	Glycosyl hydrolases family 2, TIM barrel domain	2/2
PF01565	FAD binding domain	2/2
PF00480	ROK family	2/2
PF13416	Bacterial extracellular solute-binding protein	1/2
PF07690	Major Facilitator Superfamily	1/2
PF06182	ABC-2 family transporter protein	1/2
PF00652	Ricin-type beta-trefoil lectin domain	1/2
PF00528	Binding-protein-dependent transport system inner membrane component	1/2
PF00005	ABC transporter	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_558620	76.57534246575342	21	None found	0.17 +- 0.12	True	13 PF00005 PF00480 PF00528 PF01565 PF02836 PF02837 PF02929 PF04030 PF06182 PF07690 PF13412 PF13416 PF16353	0
Streptomyces_RBGC_54405	18.086956521739133	15	None found	0.22 +- 0.13	True	9 PF00480 PF00652 PF01565 PF02836 PF02837 PF02929 PF04030 PF13412 PF16353	0