precursor_groups_40908

precursor_groups_40908

Back to index

Entry name: precursor_groups_40908
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.02 +- 0.02

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	3/3
PF00975	Thioesterase domain	3/3
PF00512	His Kinase A (phospho-acceptor) domain	3/3
PF00486	Transcriptional regulatory protein, C terminal	3/3
PF00072	Response regulator receiver domain	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_438365	106.36363636363636	14	transatpks (total overlap)	0.03 +- 0.01	True	5 PF00072 PF00486 PF00512 PF00975 PF02518	0
Streptomyces_RBGC_269432	106.36363636363636	13	None found	0.03 +- 0.02	True	5 PF00072 PF00486 PF00512 PF00975 PF02518	0
Streptomyces_RBGC_222752	193.5	14	transatpks (total overlap)	0.02 +- 0.01	True	5 PF00072 PF00486 PF00512 PF00975 PF02518	0