precursor_groups_43253

Back to index

Entry name: precursor_groups_43253
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.04 +- 0.07

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13640	2OG-Fe(II) oxygenase superfamily	3/3
PF07690	Major Facilitator Superfamily	3/3
PF13377	Periplasmic binding protein-like domain	2/3
PF10022	Uncharacterized protein conserved in bacteria (DUF2264)	2/3
PF08220	DeoR-like helix-turn-helix domain	2/3
PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	2/3
PF01547	Bacterial extracellular solute-binding protein	2/3
PF01261	Xylose isomerase-like TIM barrel	2/3
PF00528	Binding-protein-dependent transport system inner membrane component	2/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_15985	780.0	22	thiopeptide-ladderane (partial overlap)	0.01 +- 0.00	True	6 PF05977 PF07690 PF08007 PF13450 PF13640 PF13738
Streptomyces_RBGC_18208	307.45	14	None found	0.04 +- 0.06	True	9 PF00528 PF01261 PF01547 PF02826 PF07690 PF08220 PF10022 PF13377 PF13640
Streptomyces_RBGC_703603	149.9193548387097	23	terpene (partial overlap)	0.07 +- 0.10	True	9 PF00528 PF01261 PF01547 PF02826 PF07690 PF08220 PF10022 PF13377 PF13640