precursor_groups_45988

precursor_groups_45988

Back to index

Entry name: precursor_groups_45988
Common denominator: Precursor BLAST
Number of operons: 3
Average COG: 0.10 +- 0.11

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF13517	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	3/3
PF13302	Acetyltransferase (GNAT) domain	3/3
PF12867	DinB superfamily	3/3
PF07690	Major Facilitator Superfamily	3/3
PF00089	Trypsin	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_452860	34.92537313432836	17	None found	0.09 +- 0.09	True	5 PF00089 PF07690 PF12867 PF13302 PF13517	0
Streptomyces_RBGC_412497	25.434782608695645	17	None found	0.12 +- 0.12	True	5 PF00089 PF07690 PF12867 PF13302 PF13517	0
Streptomyces_RBGC_139883	27.64285714285714	14	None found	0.11 +- 0.11	True	5 PF00089 PF07690 PF12867 PF13302 PF13517	0