precursor_groups_46161

Back to index

Entry name: precursor_groups_46161
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.17 +- 0.30

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01733	amino acid adenylation domain	2/2
TIGR01720	non-ribosomal peptide synthase domain TIGR01720	2/2
TIGR01361	3-deoxy-7-phosphoheptulonate synthase	2/2
PF18152	DAHP synthase ferredoxin-like domain	2/2
PF13592	Winged helix-turn helix	2/2
PF13551	Winged helix-turn helix	2/2
PF13370	4Fe-4S single cluster domain of Ferredoxin I	2/2
PF13193	AMP-binding enzyme C-terminal domain	2/2
PF13191	AAA ATPase domain	2/2
PF08242	Methyltransferase domain	2/2
PF04820	Tryptophan halogenase	2/2
PF03621	MbtH-like protein	2/2
PF02195	ParB-like nuclease domain	2/2
PF00999	Sodium/hydrogen exchanger family	2/2
PF00975	Thioesterase domain	2/2
PF00793	DAHP synthetase I family	2/2
PF00668	Condensation domain	2/2
PF00664	ABC transporter transmembrane region	2/2
PF00550	Phosphopantetheine attachment site	2/2
PF00501	AMP-binding enzyme	2/2
PF00196	Bacterial regulatory proteins, luxR family	2/2
PF00067	Cytochrome P450	2/2
PF00005	ABC transporter	2/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_303477	219.36231884057972	28	nrps (total overlap)	0.20 +- 0.31	True	23 PF00005 PF00067 PF00196 PF00501 PF00550 PF00664 PF00668 PF00793 PF00975 PF00999 PF02195 PF03621 PF04820 PF08242 PF13191 PF13193 PF13370 PF13551 PF13592 PF18152 TIGR01361 TIGR01720 TIGR01733	0
Streptomyces_RBGC_281329	309.1891891891892	28	nrps (total overlap)	0.14 +- 0.28	True	23 PF00005 PF00067 PF00196 PF00501 PF00550 PF00664 PF00668 PF00793 PF00975 PF00999 PF02195 PF03621 PF04820 PF08242 PF13191 PF13193 PF13370 PF13551 PF13592 PF18152 TIGR01361 TIGR01720 TIGR01733	0