precursor_groups_468

Back to index

Entry name: precursor_groups_468
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.04 +- 0.15

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF01063	Amino-transferase class IV	4/5
TIGR01733	amino acid adenylation domain	3/5
TIGR01536	asparagine synthase (glutamine-hydrolyzing)	3/5
PF18130	ATP-grasp N-terminal domain	3/5
PF13537	Glutamine amidotransferase domain	3/5
PF13535	ATP-grasp domain	3/5
PF13193	AMP-binding enzyme C-terminal domain	3/5
PF07690	Major Facilitator Superfamily	3/5
PF03547	Membrane transport protein	3/5
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	3/5
PF00733	Asparagine synthase	3/5
PF00550	Phosphopantetheine attachment site	3/5
PF00501	AMP-binding enzyme	3/5
PF00144	Beta-lactamase	3/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_580400	1532.52	22	other (total overlap)	0.02 +- 0.00	True	14 PF00144 PF00501 PF00550 PF00733 PF01063 PF02668 PF03547 PF07690 PF13193 PF13535 PF13537 PF18130 TIGR01536 TIGR01733	1
Streptomyces_RBGC_131277	73.125	17	lantipeptide (partial overlap)	0.04 +- 0.05	True	7 PF00376 PF00480 PF03009 PF03459 PF06224 PF12802 TIGR00638	0
Streptomyces_RBGC_101251	8.459016393442623	15	None found	0.24 +- 0.40	True	3 PF00149 PF01063 PF02872	0
Streptomyces_RBGC_221164	3192.75	22	other (total overlap)	0.01 +- 0.01	True	14 PF00144 PF00501 PF00550 PF00733 PF01063 PF02668 PF03547 PF07690 PF13193 PF13535 PF13537 PF18130 TIGR01536 TIGR01733	1
Streptomyces_RBGC_229741	2573.9999999999995	22	other (total overlap)	0.01 +- 0.01	True	14 PF00144 PF00501 PF00550 PF00733 PF01063 PF02668 PF03547 PF07690 PF13193 PF13535 PF13537 PF18130 TIGR01536 TIGR01733	1