precursor_groups_6297

Back to index

Entry name: precursor_groups_6297
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.17 +- 0.31

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR03177	Flp pilus assembly protein CpaB	2/2
PF16976	Flp pilus assembly protein RcpC/CpaB	2/2
PF13400	Putative Flp pilus-assembly TadE/G-like	2/2
PF10609	NUBPL iron-transfer P-loop NTPase	2/2
PF07811	TadE-like protein	2/2
PF00691	OmpA family	2/2
PF00482	Type II secretion system (T2SS), protein F	2/2
PF00437	Type II/IV secretion system protein	2/2
PF18451	Contact-dependent growth inhibition CdiA C-terminal domain	1/2
PF13367	PrsW family intramembrane metalloprotease	1/2
PF08666	SAF domain	1/2
PF07730	Histidine kinase	1/2
PF00196	Bacterial regulatory proteins, luxR family	1/2
PF00072	Response regulator receiver domain	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_686460	95.39568345323741	28	None found	0.19 +- 0.32	True	9 PF00437 PF00482 PF00691 PF07811 PF08666 PF10609 PF13400 PF16976 TIGR03177	0
Streptomyces_RBGC_399842	146.9514563106796	27	None found	0.15 +- 0.29	True	13 PF00072 PF00196 PF00437 PF00482 PF00691 PF07730 PF07811 PF10609 PF13367 PF13400 PF16976 PF18451 TIGR03177	0