precursor_groups_6514

Back to index

Entry name: precursor_groups_6514
Common denominator: Precursor BLAST
Number of operons: 5
Average COG: 0.06 +- 0.06

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF08352	Oligopeptide/dipeptide transporter, C-terminal region	5/5
PF00528	Binding-protein-dependent transport system inner membrane component	5/5
PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle	5/5
PF00296	Luciferase-like monooxygenase	5/5
PF00005	ABC transporter	5/5
TIGR03860	FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	4/5
PF02771	Acyl-CoA dehydrogenase, N-terminal domain	4/5
TIGR03564	F420-dependent oxidoreductase, MSMEG_4879 family	3/5
PF18029	Glyoxalase-like domain	3/5
PF14226	non-haem dioxygenase in morphine synthesis N-terminal	3/5
PF08028	Acyl-CoA dehydrogenase, C-terminal domain	3/5
PF07920	Protein of unknown function (DUF1684)	3/5
PF03171	2OG-Fe(II) oxygenase superfamily	3/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_263375	154.89361702127658	23	None found	0.09 +- 0.08	True	13 PF00005 PF00296 PF00496 PF00528 PF02771 PF03171 PF07920 PF08028 PF08352 PF14226 PF18029 TIGR03564 TIGR03860	0
Streptomyces_RBGC_40449	227.84415584415586	27	None found	0.07 +- 0.06	True	16 PF00005 PF00296 PF00496 PF00497 PF00528 PF02574 PF02771 PF03171 PF07920 PF08028 PF08352 PF14226 PF18029 TIGR01726 TIGR03564 TIGR03860	0
Streptomyces_RBGC_463492	261.8507462686567	27	None found	0.06 +- 0.07	True	16 PF00005 PF00296 PF00496 PF00497 PF00528 PF02574 PF02771 PF03171 PF07920 PF08028 PF08352 PF14226 PF18029 TIGR01726 TIGR03564 TIGR03860	0
Streptomyces_RBGC_335625	136.99115044247787	21	None found	0.09 +- 0.04	True	8 PF00005 PF00296 PF00484 PF00496 PF00528 PF05901 PF08352 TIGR03860	0
Streptomyces_RBGC_482471	780.6724137931035	38	t1pks-otherks (partial overlap)	0.03 +- 0.02	True	47 PF00005 PF00107 PF00109 PF00296 PF00441 PF00486 PF00496 PF00501 PF00528 PF00534 PF00550 PF00583 PF00586 PF00698 PF00795 PF00931 PF01814 PF02635 PF02769 PF02770 PF02771 PF02801 PF03704 PF04055 PF04820 PF04909 PF08240 PF08352 PF08541 PF08545 PF08659 PF13193 PF13340 PF13419 PF13439 PF13649 PF13738 PF14765 PF16197 TIGR01509 TIGR03619 TIGR04043 TIGR04044 TIGR04045 TIGR04046 TIGR04047 TIGR04050	1