precursor_groups_70050

Back to index

Entry name: precursor_groups_70050
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.07 +- 0.11

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF00296	Luciferase-like monooxygenase	2/2
TIGR01728	ABC transporter, substrate-binding protein, aliphatic sulfonates family	1/2
PF18029	Glyoxalase-like domain	1/2
PF13517	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	1/2
PF09084	NMT1/THI5 like	1/2
PF08028	Acyl-CoA dehydrogenase, C-terminal domain	1/2
PF02927	Cellulase N-terminal ig-like domain	1/2
PF02913	FAD linked oxidases, C-terminal domain	1/2
PF02771	Acyl-CoA dehydrogenase, N-terminal domain	1/2
PF02770	Acyl-CoA dehydrogenase, middle domain	1/2
PF02018	Carbohydrate binding domain	1/2
PF01565	FAD binding domain	1/2
PF01435	Peptidase family M48	1/2
PF00881	Nitroreductase family	1/2
PF00759	Glycosyl hydrolase family 9	1/2
PF00528	Binding-protein-dependent transport system inner membrane component	1/2
PF00005	ABC transporter	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_509551	218.73913043478262	20	None found	0.06 +- 0.13	True	14 PF00005 PF00296 PF00528 PF00759 PF01565 PF02018 PF02770 PF02771 PF02913 PF02927 PF08028 PF09084 PF13517 TIGR01728	0
Streptomyces_RBGC_416458	72.55813953488371	16	t1pks-nrps (partial overlap)	0.08 +- 0.05	True	4 PF00296 PF00881 PF01435 PF18029	1